Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00226 AGATGAAGGAGAAGGTGGTTGGTGGAAGGAGCAAGGTTTTCTTCCTTTTCTGGCTTGGAATGACTCTGAGGCTTTGTTTCTTGCTTGGTGCCTCTTCTGAGAAGACAACATTGAGAAGAGGTTTAAGGGAGACCAATCTGCCACCACCAACTTCTGATCCTGGAGTCATGCTCAATACAAAGAACCGTCAACAGTTGGTAGTTGACAATGGTATTGTTTCGGTCACTTTTTCAAGACCTGAGGGCTACATTCTTGGAATTTCGTATCAGGGAATTGACAATATACTTGAAGATGAAAACGAAGATCAAGATAGAGGGTACTTGGACGTCGTTTGGAATACACCAGGAAAGCCTAGTAATTTTCAAAGAATCTTCGGGACAAACTTCTCGTTTATAGCAGCAGATGAGAACATGGTGGAGCTGTCATTTTCAAGAACATGGACATCATCCATGAATGGCTCAAGTGTCCCCATGAACATTGACATAAGATACATATTGAGAAGGGGTGATTCAGGGTTTTATTCTTATGTAATATTTGATCGCCCTGAAGGATTCCCTGCACTGGAGATTGACCAATTTAGGATTGTTTTCAAACTCAAGAAAGACAGGTTCAAGTACATGGCCATATCAGATGAAAGACAAAGAAACATGCCAACAATGAGAGACAGAGAAACAGGTCAAATCCTAGCTTACCGTGAAGCAGTTCTATTAACCAGACCTTCCAACCCAGAGTTTAGAGGAGAGGTAGATGATAAATATCAGTATTCATGTGAGAACAAGGCTAACACTGTTCATGGATGGATCAGTGTTGATGCTAAAGCACCAGTGGGTTTCTGGATGATAACAGCCAGTAATGAATTCCGGAATGCTGGGCCCGAGGTAACCATGGCATTTGAAGAAGGAGAACCTTATAAAAAGGTTTTTGGCCCTGTATTTGCCTACATTAACAATGCTTCAAGTGAGGATGATACACTATCCCTCTGGTATGATGCTGTGCAGCAGCAAGCCAAAGAAGTCAGAAGTTGGCCTTATGAATTTCCTCAATCAGTAGATTTCATTCCACCCAGTCTAAGGGGAATAGTTTTGGGAAGATTACTAGGCTATCAATTCTGGACTCAAGCTGATACAAAGGGCTTCTTCCTAATAAATAATATTGTGCCTGGTGACTATAATCTGTATGCATGGGTTCCTGGCTTCATTGGTGATTACAGATATAATGCTACAATAACCATCACACAAGGGGGAGTCATCAAATTGGATTCACTTGTGTATGTTCCTCCAAGAAATGGACCAACCATGTGGGAAATTGGGTTTAGGCAATACGGATTGTGGGAACGATACACTGATTTATATCCAAATGATGATCTTGTTTATACTGTTGGTGTTAGCAAGTACAGTAAGGATTGGTTTTTTGCTCATGTGACAAGAAACACAGGAAACAAAACATACCAGCCAACGACATGGCAGATTGTATTTGAACATCCAACACAAATAATAAGAGGAAACTACACTTTGCAATTGGCCTTGGCATGCACTGCTGATGCTGACTTGCAGGTTCGGTTCAATGACCCTTCTACTGCTAACCCACCAGACTTTGCAACGGGGAAAATAGGAGGAGATAGTGCCATAGCAAGGCATGGTGTGCATGGATTGTATAGGCTATTCAGCATTAACATAACAAGTGATCGTATTGTGAGAGGAACAAACACCATCTACCTGAGGCAATCAAGAGCTATGAACCCTTTTCAAGGAGTTATGTATGATTATATCCGTTTAGAGCGACCTCCAATTACACTCATGTGATAGTGTCCAACTTCAGCAACACAATAAAAAATAGCTGTGTGTATAGAATTTAGTCTATTCTTTCATCTTAGAGTTTAGGGGGGTAAAAGGGGTGATTAGCTAGAGAAGTTACACTGATGTGTGACTGTTGAAAAAAAAAATGTT 1946 0.4096 MKEKVVGGRSKVFFLFWLGMTLRLCFLLGASSEKTTLRRGLRETNLPPPTSDPGVMLNTKNRQQLVVDNGIVSVTFSRPEGYILGISYQGIDNILEDENEDQDRGYLDVVWNTPGKPSNFQRIFGTNFSFIAADENMVELSFSRTWTSSMNGSSVPMNIDIRYILRRGDSGFYSYVIFDRPEGFPALEIDQFRIVFKLKKDRFKYMAISDERQRNMPTMRDRETGQILAYREAVLLTRPSNPEFRGEVDDKYQYSCENKANTVHGWISVDAKAPVGFWMITASNEFRNAGPEVTMAFEEGEPYKKVFGPVFAYINNASSEDDTLSLWYDAVQQQAKEVRSWPYEFPQSVDFIPPSLRGIVLGRLLGYQFWTQADTKGFFLINNIVPGDYNLYAWVPGFIGDYRYNATITITQGGVIKLDSLVYVPPRNGPTMWEIGFRQYGLWERYTDLYPNDDLVYTVGVSKYSKDWFFAHVTRNTGNKTYQPTTWQIVFEHPTQIIRGNYTLQLALACTADADLQVRFNDPSTANPPDFATGKIGGDSAIARHGVHGLYRLFSINITSDRIVRGTNTIYLRQSRAMNPFQGVMYDYIRLERPPITLM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00226 599 SUPERFAMILY Galactose-binding domain-like 428 592 IPR008979 -
Pste7g00226 599 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 289 365 - -
Pste7g00226 599 CDD RGL4_C 433 592 - -
Pste7g00226 599 CDD RGL4_M 365 421 IPR029413 -
Pste7g00226 599 Pfam Rhamnogalacturonate lyase family 55 248 IPR010325 -
Pste7g00226 599 CDD RGL4_N 64 323 - -
Pste7g00226 599 Gene3D - 438 592 - -
Pste7g00226 599 Gene3D - 57 294 IPR014718 GO:0030246
Pste7g00226 599 Pfam Polysaccharide lyase family 4, domain II 366 417 IPR029413 -
Pste7g00226 599 SUPERFAMILY Starch-binding domain-like 362 420 IPR013784 GO:0030246
Pste7g00226 599 Gene3D - 357 420 - -
Pste7g00226 599 Pfam Polysaccharide lyase family 4, domain III 446 591 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00226 Pste-Chr7 2134801 2147647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00226 51 595 Polysaccharide Lyase AT1G09910 46.929 0.0 557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01254 1 4010215 4018390 Pste7g00226 7 2134801 2147647 PCT