Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00222 ATGGCATTCTTCACCTCTTCTTCATACTCTAATGAGTCTAACCAACACCAAAAACATGCCACGTTTTTCATATTTACCATCTTCACTTTGTTCCATGCACTCTTCAACACTGTAGAGTGCGTTTCCTTCAACTTTTCTATCTTCCAACAAAACATGGATGTAATTGACTTTAAGGGTGATGCCTTTTCCTCAAATGGTGTTCTTCAACTCACAAGGAACCAAGTTGATGTCAACATCACATTCAGCGTTGGTAGAGCCTCATATAATCAACCAGTGACGCTTTGGGATAGAAGAACTAAAAAGCTCACTGATTTCACAACCCATTTCTCTTTTGTCATGAAAGCTATTGACCCATTAAAAGTTGGTGATGGGTTAGCCTTTTTCATTGCACCATTTGATTCTGTCATTCCAAACAATTCAGTTGGTGGCTACCTTGGCCTATTCAGCAATGTATCAGCTTTCAACACTACGAAAAATCAGTTAGTGGCAGTTGAGTTCGACAGTTTCAAGAATGATTGGGATCCAAGCTCTGATCATGTGGGTATCAATGTCAATTCCATCAAATCAGTCTCCAATGTCACTTGGAAGAGCAACATGAAAAATGGGTCAGTTGCTAATGCTTGGATATGGTACAACTCTTCAACCAAAAATCTCTCTGTCTTCCTTACTTATGCTGATAATCCAAAATTTAGTGGCAATTCTAGTCTTTCATATGTCATTGATTTAAGGGACGTGTTGCCAGAGTTTGTTAGAATAGGCTTTTCTGCTGCCACAGGTTCTTGGGTTGAAATACACAACATTCTGTCTTGGTCATTCAATTCAAATTTGGATGTGAATACTAGGAAAAAGACTAAGGTTAGTTTAGTGGTTAGTATAAGTGTTGGATTGGGTTGTTTAGCTTGTGTTGTAGGTCTATTATGGTTTGCCATTTGGAGATGGAGAAAAAAGCCAAATGGTGGAAAGGAGAGCAACAACATAGGTCTTGATGCTTCTATGGAGTATGAGTTTGAGAGAGGAACTGGTCCAAAGAGGTTCACATACCAAGAACTAAGTAATGCAACTGACAACTTTGCAGAAGAAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGTTTAATTGAGAACTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCAAAAGGGTCAAGGCAAGGAAAAAAGGAATATGTCTCAGAAGTGAGAGTAATCAGCAGGCTAAGACATAGAAACTTGGTTCAACTCATAGGGTGGTGCCATGAACAAGGTGAACTTCTTCTTGTTTATGAATACATGCCTAATGGGAGCCTTGATTCTCATCTATTTGGAAATAGAGTCATGCTTTCATGGGGGGTGAGACACAAGGTGGCCTTAGGTTTGGCCTCAGCTCTTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTAGTGCATAGAGACATTAAGTCAAGTAATGTCATGTTGGATGCAAATTTCAATGCCAAGCTTGGTGACTTTGGTCTTGCAAGGTTGGTGGACCATGAACTTGGTTCTCAAACAACTGTTTTGGCAGGCACCATGGGGTACCTAGCCCCTGAGTGTGTCACAACAGGTAAATCAAGCAAGGAATCTGATGTGTACAGTTTTGGAGTTGTTGCACTTGAAATCACATGTGGTAGAAGGCCAGTGGAGGCAAAAGAAGAGACTATTAAGGTTAGGCTTGTGGAGTGGGTGTGGAGCCTCTATGGAAAAGGGAAACTACTTGAAGCAGTTGATAAGAAATTGAGTTGGGAATTTGATGAACCACAATTGGAATGCTTGATGATTGTTGGTTTGTGGTGTTGTCACCCTGATCCTACCATGAGACCCTCCATTAAGCAAGTGATTAGTGTCCTCAATTTTGAAGCCCCTTTGCCTAGTCTACCTTCCAAGTTGCCTGTGGCAATGTACTTTGCACCTCCCATGGAGGTGTGCAAATTCTCCTACACTTCATCTGGTGCTACCAGCACAACCAAAGAATCGTCCACTTACTCATCAATGTCTCAAGGGTCAGGAAAATCTCTATTATAG 2052 0.4113 MAFFTSSSYSNESNQHQKHATFFIFTIFTLFHALFNTVECVSFNFSIFQQNMDVIDFKGDAFSSNGVLQLTRNQVDVNITFSVGRASYNQPVTLWDRRTKKLTDFTTHFSFVMKAIDPLKVGDGLAFFIAPFDSVIPNNSVGGYLGLFSNVSAFNTTKNQLVAVEFDSFKNDWDPSSDHVGINVNSIKSVSNVTWKSNMKNGSVANAWIWYNSSTKNLSVFLTYADNPKFSGNSSLSYVIDLRDVLPEFVRIGFSAATGSWVEIHNILSWSFNSNLDVNTRKKTKVSLVVSISVGLGCLACVVGLLWFAIWRWRKKPNGGKESNNIGLDASMEYEFERGTGPKRFTYQELSNATDNFAEEGKLGEGGFGGVYKGLIENSNLEVAVKRVSKGSRQGKKEYVSEVRVISRLRHRNLVQLIGWCHEQGELLLVYEYMPNGSLDSHLFGNRVMLSWGVRHKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVEAKEETIKVRLVEWVWSLYGKGKLLEAVDKKLSWEFDEPQLECLMIVGLWCCHPDPTMRPSIKQVISVLNFEAPLPSLPSKLPVAMYFAPPMEVCKFSYTSSGATSTTKESSTYSSMSQGSGKSLL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00222 683 FunFam L-type lectin-domain containing receptor kinase IX.1 342 433 - -
Pste7g00222 683 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Pste7g00222 683 ProSiteProfiles Protein kinase domain profile. 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00222 683 FunFam Lectin-domain containing receptor kinase A4.3 434 646 - -
Pste7g00222 683 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Pste7g00222 683 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Pste7g00222 683 FunFam L-type lectin-domain containing receptor kinase IX.1 39 285 - -
Pste7g00222 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 280 IPR013320 -
Pste7g00222 683 ProSitePatterns Legume lectins alpha-chain signature. 246 255 IPR000985 -
Pste7g00222 683 SMART serkin_6 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00222 683 CDD lectin_legume_LecRK_Arcelin_ConA 41 276 IPR001220 GO:0030246
Pste7g00222 683 Gene3D Transferase(Phosphotransferase) domain 1 434 647 - -
Pste7g00222 683 MobiDBLite consensus disorder prediction 660 683 - -
Pste7g00222 683 PANTHER - 62 633 - -
Pste7g00222 683 Gene3D - 39 290 - -
Pste7g00222 683 Pfam Legume lectin domain 41 284 IPR001220 GO:0030246
Pste7g00222 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pste7g00222 683 Pfam Protein kinase domain 358 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00222 683 SUPERFAMILY Protein kinase-like (PK-like) 341 646 IPR011009 -
Pste7g00222 683 CDD STKc_IRAK 371 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00222 Pste-Chr7 2115316 2117367 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00222 38 644 Receptor kinase-like Gene Family AT5G10530 51.763 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste7g00222 Pkinase 3e-52 CL0016