LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00216	TACTGTAAGTGTGACATATCTTCTGATGTATGCAGCACAAGACATTGGAAAGACAAATCGTTGCCTGTTAACCCTCCACTGTTGGAGGCCAGAGGTGCTCGCTGCTCTGTGAAACCAGCCTCACGCAGTACCCTCTTGTTTAGGAAAGATATGAGACCTGAACCTTCGCCCAGGGCCCACGAATCAACTCCCAACTTGGAGTGGACAGGCCTGCAATTATACAGAGACAACCCAGCCCAGCAAAGCTACAGATGTGTCCAACCCTCCCTAATGCCCCCACATGGGTTACAAGCTGACGCAACTCAGCTCGGCAATGAGACTTGCATGCTAAGAGTTTATAAAGTTAGGCTAAATGCCAGTGCCGATGCACAACTTTATACAAACTTTTACTACAATTCTTGTCCAAAACTCCTCTCCACTGTGAAATCCACAGTGCAGTATGCCATATCAAAGGAGGCCCTTATGGGTGCTTCTCTCCTCCGCTTGAACTCTGCAAGTGGATACCAAGTCATTGAGAGCATTAAATCAGCTGTAGAGAAAGTGTGCCCTGCTGTTGTCTCCTGTGCACATATCCATGCCATCGCAGCCAGAGACTCTTCTCAGATACAAAAGACATTGGAAAGACAATCCGTGGGTAAATTGACTGCTACCCTTGAAGCGCATTCTTGCAAA	672	0.4747	YCKCDISSDVCSTRHWKDKSLPVNPPLLEARGARCSVKPASRSTLLFRKDMRPEPSPRAHESTPNLEWTGLQLYRDNPAQQSYRCVQPSLMPPHGLQADATQLGNETCMLRVYKVRLNASADAQLYTNFYYNSCPKLLSTVKSTVQYAISKEALMGASLLRLNSASGYQVIESIKSAVEKVCPAVVSCAHIHAIAARDSSQIQKTLERQSVGKLTATLEAHSCK	224

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00216	224	PANTHER	PEROXIDASE 72-RELATED	163	201	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pste7g00216	224	AntiFam	Antisense to SRP RNA	22	87	-	-
	Pste7g00216	224	ProSiteProfiles	Plant heme peroxidase family profile.	124	212	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste7g00216	224	Gene3D	-	124	162	-	-
	Pste7g00216	224	Gene3D	-	163	219	-	-
	Pste7g00216	224	SUPERFAMILY	Heme-dependent peroxidases	124	202	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Pste7g00216	224	Pfam	Peroxidase	165	202	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g00216	Pste-Chr7	2065294	2070860	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g00216	122	199	Peroxidase	AT5G05340	49.091	4.56e-24	95.9

Showing 1 to 1 of 1 entries