Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00195 TGCACACTCCAAAGCTTTTGTTGCTTTGTGCTTAATGGAAGGCCCTTGAGCTTTTCTCTCTTTCTCTGTCTCTCTTCTTTAGGTTTCACTCTTTCACAGTTTCACTCACTCTGCAATAATATAATATCACTCATAATCTCTCTTCTTCTTCATATTCTTGTTTCCTCACACTCCCTCAGTGATTAAATTTGGATTCTGATGTCTCCGCCACTGCTGGTTGCTGAAGAAGAAGGGCAGAGCAATGCCTCAATGGTAGCATCTGCATCTTCACAACCATTGGACCGTTTCTCCCCAAATGAGGCTAGATTGAAAGAACGCAATTATCTGGGATTATCAGATTGCTCTTCTGTGGAAAGTTCTACTGCCCCAAGCTTGTCTGGTGGGAAAAAGGAGAACCTGAATTTGAAGGCTACTGAGTTGAGGCTTGGCCTTCCTGGATCCCAGTCACCTGAAAGGGATCCAGATCTTTTTTCATTGAACTCGGCAAAGCTTGACGAGAAACCACTGTTTCCTCTGCTTCCTACAAAGGATGGAATCTGCTCATTGTCCCAAAAAACTGTGGTCTCAGGCAACAAAAGAGGTTTTGCTGACACAATGGACCCTGAGTTTCCTGGCAATGCAGGGATAAACATGATGCTATCACCTAAACCTGCTGGAGTTCAGCCAACCACAGTGAAAGAAATACCAAGCAAGGTGTTACAAGAACGTCCTTCTGCAGCAAATGGAACTGGTCATAACCACACAGGAGCTTCTATCAGTGGCAGTGCACCTGCTTCTAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCATTGGCCACAACTTCAAAGAACAATGATGAAGTAGATGGAAAACCTGGTCCAGCTGCACTCTTTGTGAAGGTCAGCATGGATGGTGCTCCCTATCTGAGGAAGGTAGATCTAAGAAATTATACAACATACCTGGAATTGTCTTCTGCTCTTGAGAAGATGTTCAGCTGTTTCACTCTAGGTCAATGTGGTTCGCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGTTAAAGGACCTCCTGCATGGTTCAGAATACGTACTGACTTATGAAGATAAAGATGGGGACTGGATGCTTGTTGGAGATGTACCATGGGATATGTTCATTGATACATGCAAAAGGCTGAAAATAATGAAGGGTTCTGATGCCATCGGCTTAGTTTGTTTCCTTGCAAATTGTAATTCAAGGAAACTATTATTGGTAGTGCCTCTGGTCTCCCAGGGCCATGGAAAAATCCAGGAGCAGGAGCTAGTTGGTAATGAAACTTTTGACTATGTTTTGTGTACTATGGTGAAGTTGCTGGATATGAAAAAGGTGTGAAAAAGAACTATGGTATAAATGACTAAATACCGGGTTTTGATGGTTAACTGCTATTCAAGATGTGTTCTATCATTACAAGTACCAGAATAGTGTCTTGGTCTTTTGTTTGTGTTACATTTGTTCTACTATAATACCTTATGAAGTTACCTTGAATATTGGTAATTGTGGAGTCTGTAATCTTTATAGGAATCTGTTTGTTTGGATAAGTTGAATGTATGTTACAGTCAGTGTATTTTTCTCAGTGATGTGCTATTTCCCTAGTTTTTCTTTTTTCTTTCTTTTTACTCTTGAAGGGCATTTTTTTATGCCTACCTCTATAAATCAAATGATTCCTTACAGCCCA 1714 0.4113 MSPPLLVAEEEGQSNASMVASASSQPLDRFSPNEARLKERNYLGLSDCSSVESSTAPSLSGGKKENLNLKATELRLGLPGSQSPERDPDLFSLNSAKLDEKPLFPLLPTKDGICSLSQKTVVSGNKRGFADTMDPEFPGNAGINMMLSPKPAGVQPTTVKEIPSKVLQERPSAANGTGHNHTGASISGSAPASKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRNYTTYLELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLVCFLANCNSRKLLLVVPLVSQGHGKIQEQELVGNETFDYVLCTMVKLLDMKKV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00195 390 MobiDBLite consensus disorder prediction 47 62 - -
Pste7g00195 390 Gene3D - 226 343 - -
Pste7g00195 390 MobiDBLite consensus disorder prediction 47 66 - -
Pste7g00195 390 ProSiteProfiles PB1 domain profile. 229 333 IPR000270 GO:0005515
Pste7g00195 390 MobiDBLite consensus disorder prediction 1 34 - -
Pste7g00195 390 FunFam Auxin-responsive protein 224 341 - -
Pste7g00195 390 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 67 336 IPR003311 GO:0005634|GO:0006355
Pste7g00195 390 MobiDBLite consensus disorder prediction 170 192 - -
Pste7g00195 390 SUPERFAMILY CAD & PB1 domains 227 330 - -
Pste7g00195 390 MobiDBLite consensus disorder prediction 14 30 - -
Pste7g00195 390 Pfam AUX/IAA family 72 337 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00195 Pste-Chr7 1908219 1913582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00195 231 329 B3 DNA Binding Superfamily AT1G19220 30.303 4.68e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste7g00195 AUX_IAA 6.6e-87 CL0072