LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00193	ATGAAACATTTACATCAATTAATGGCTCCATTTCTCTTATTTGCTTTAGTGTTAACCAGTCAAGTGATGGCTGGATTCAGCACACCCCTGCCGCCGCCGCCACTACCACCTCCACCTATTTATGGGAAACATACAACAATTTTGAGCATAGATGGTGGTGGTATCAGGGGGATTATTGCCGCAACTGTTCTTGATTATTTAGACCAGACTCTTAAGGCAAAGGATCCAACAACATCATTAGCACATTATTTTGATGTGATAGCAGGAACAAGTACTGGTGGAATCATGACTGCTATGATAGCAACCCCAAAGTCGTCTGATCCCAATCGTGCACTCTTTACTCCATCTGAAGTAGTACACTTCTACAAAGAAAAGGGCCCTAAAATATTTGAACCTAGATGTTTGGTTTTCTGTGATGAACCAACATGCAGTTTGATTCCATCTTGTCCCAAGTATGATGGAGAGTCCTTAAAAAATATAAGTCGTAAGATATTGAAGGACACACGATTGAACCAAACATTGACAAACGTGGTTATACCAGCTTTCGACAAGTCGAAAATCAAGCCAGTTATATTCTCAACCTATAAGTTGAAGGAGGAACCTTATTTAAATGCAAAACTCTCAGATATATGCATCGGCACTTCTGCTGCACCAACTTATCTACCATCCCACCAATTTCAGAATGGGGATGTTGATTTTGATTTGGTTGATGGTGCTCTGGCTGCTGACAATCCAGCCCTGGTTGCTGTGAGTGAAGTGTTGCAACACAGTGAGCACAAGGAAATGTTGTTGCTGTCATTAGGAACTGGAAAAACTCCAAAGAAAGAGAAGGTATCAGGCTTTGATACAACGTGTGCCCTTGAGTTTCTTGCTTCCAACATTGACGTTGTTAAAGAGGCTGTACATAGTACAAACATCATCCAATACTACCTTGCCTCAGTGTTTCCTGGTGTGTTGCCAGCAAATAACTATCTTCGAATTCAGGAATATGACCTGGATCCATCCTTGGCACAAATTGATAATGCTGACAAAGGAAACATGGATAAGCTGGAAAAGGTGGGAAGGAACCTGTTGAAACAAAAAGTGAAGAGGATGAATGTGAATACTTTTATTCCTGTTATACTTAACCAAACAAATGCTGAAGCTCTTGACAGGTGCATATACTTTCATTCTTAA	1176	0.4056	MKHLHQLMAPFLLFALVLTSQVMAGFSTPLPPPPLPPPPIYGKHTTILSIDGGGIRGIIAATVLDYLDQTLKAKDPTTSLAHYFDVIAGTSTGGIMTAMIATPKSSDPNRALFTPSEVVHFYKEKGPKIFEPRCLVFCDEPTCSLIPSCPKYDGESLKNISRKILKDTRLNQTLTNVVIPAFDKSKIKPVIFSTYKLKEEPYLNAKLSDICIGTSAAPTYLPSHQFQNGDVDFDLVDGALAADNPALVAVSEVLQHSEHKEMLLLSLGTGKTPKKEKVSGFDTTCALEFLASNIDVVKEAVHSTNIIQYYLASVFPGVLPANNYLRIQEYDLDPSLAQIDNADKGNMDKLEKVGRNLLKQKVKRMNVNTFIPVILNQTNAEALDRCIYFHS	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00193	391	SUPERFAMILY	FabD/lysophospholipase-like	44	376	IPR016035	-
	Pste7g00193	391	Pfam	Patatin-like phospholipase	48	112	IPR002641	GO:0006629
	Pste7g00193	391	Gene3D	Cytosolic phospholipase A2 catalytic domain	40	390	-	-
	Pste7g00193	391	ProSiteProfiles	Patatin-like phospholipase (PNPLA) domain profile.	48	250	IPR002641	GO:0006629
	Pste7g00193	391	PANTHER	XYLOSE ISOMERASE	38	386	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g00193	Pste-Chr7	1871429	1875400	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g00193	31	369	Miscellaneous Gene Families	AT2G26560	42.192	1.23e-79	249