Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00190 CCAACTAATGGCTGCATTCAATGCACCTTTGCCGTTACCATCTCCATCCTATGGAAACTGCACAACCATTCTTAGCATTGATGGTGGTGGTATCAAGGGAATCATTCCCGCAACTGTTCTTCGTCACTTAGAAAACGCTCTTAAGGGGAAGGATCCAAATGCATCTTTAGCACATTATTTTGATGTGATATCAGGAACAAGTACTGGTGGAATCATGAGTGCTATGTTATCAGCTCCGAAACCATCTGATCCCACTAGTCCTCTCTTTACTCCTTCTGAAATAGTAAATTTCTACAAGAAAAATGGCCCTCAGATATTTAAATCTAGTTGGTGGCCAACATGTCCCAAGTATGATGGAAAGGTTTTACGTGATTTAGCTCACCACATATTGAACGAGACACGGCTGAGTCAGGCATTGACCAACGTAGTAATACCAACTTTTGACCAAAAGCAACTCAAGCCAATTACATTCTCAAGCTTTAAGGCTATGGTTGCTGTGAGTGAAGTGTTACAAAGCAGTGAGCAGCTGAGAGAAATCGTGTTGCTGTCTTTAGGAACTGGAAAACCTAAAAAAGAGGATTTAAGTAGCATCCATAATGACGTGTGTCAAGGTTGGTGGCTAGTTCACAACCTTGATGTTCTTGATGAGACTATATTTAGAACAGACCAAATCCATTACTACCTTGCCACAGTGTTCCCTGGCCTCTTGCCTGCCGATAACTATCTCAGAATTCAGGAATATAATCTGGATCCATCCATGAACGAGATGGATAACGCTGATGAAGATAACATGCGCAACCTGGAAACAGCAGGAAATAGCTTGTTGAAGGAGAATGTTAAGAGGGTGAACGTGAATACTTTTACCCCGTATGAACTAAACTACACAAATGCTGATGCTCTTGATAGGTTGGCTGATAGATTATATGAAGAGAGGCAGTTGCGTCTGAAAAGGAAATTTATGGAAAATGAAGAAAGTCAAGCTATTAAAACTGTCAAGTTATCTTCTCGCAAGAGACCATTGACCATGGTGGACCTTGATACTCAGGACCCAACAACATCATTAGCAGATTACTTTGATGTGATGACAGGAACAAGTACTGGTGGACTCATCAGTCAAAACGCTAAGAGGATGAATGTGAATACTTTTATTCCATATGAAATTTACGGCAAAAATGTTGAAGTTCTTGATAGCCAACTGATGGCTGGATTCAATGCACAGCTACCACCACTGCTACCACCTCCATCCTATGGAAACTATACTACCATTTTGAGCATAGATGGTGGTGGTATCAGGGGAATCATTCCCGCAACTGTTCTTGAGCACTTACACAAGGCTCTCAAGGCAAAGGACCCAACAGCATCATTAGCACATTATTTTGATGTTATTGCAGGAACAAGTACTGGTGGACTCGTCAGTGTTATGTTAGCAGCCCCAGACCCAGATAACGACAATCGTCCTCTCTTTACTCCTTCGAAAATCGTAAAATTCTACAAAGACAATGGCCCTCAAATATTTGATTCTGGTTTGATTCCAACATGTCCCGTGTATGATGGAGTATACTTACGAGATATAACTCATAAGATGTTGAAAGAAACACGACTGAATCAAACACTGACGAACGTGGTGATACCAACTTTCGACCAGAAGAAAATCAAGCCAGTTACATTCTCAAACTATAAGAGGAAGACAGAAACCTACTTGAATGCGAAACTGTCAGATATATGCATTGGCACTTCAGCTGCACCCTCTTATCTACCATCCCACCAATTTGTGAACGAGGGTGTTGAATTTGATTTGATTGATGGTGGTGTGACTGCTAATAATCCAGCACTGGTGGCTGTGAGTGAAGTGATCCAGCACAGTGAGGAGAAAGAAATGTTATTGCTGTCATTAGGAACTGGAATTCCAAGAAAACAGGATTTAACTAGCATCCATCAAGACTTGTGTAAAGCAGAGTGGATAGTTGAAAGTGCTGACGTTGTTACTGAGTCTATGTTTAGAACAAACCAGATTCATTACTACCTTGCCACAGTGTTCCCAGGCCTCTTGCCAGCTCATAACTATCTCAGAATTGAGGAATATAACTTGGATCCATCCATGAAAGATATGGATAACGCGGACAAAGATAACATGGATAACCTAGAAAAGGTAGGGAAAAAGTTGTTGCAGGAAAAGGTTAAGAGGATGAATGTTAATACTTTTATTCCATATGAATTGGACCAAACAAATGCTAAAGCTCTTGACAGGTTGGCTGAGAAATTATATGCAGAGAGGCAGTTGCGTCTGAGAAGGAAATCTATGGAAAATGGAGGAAGCAGAACTATTAAAACTTCT 2335 0.4086 MAAFNAPLPLPSPSYGNCTTILSIDGGGIKGIIPATVLRHLENALKGKDPNASLAHYFDVISGTSTGGIMSAMLSAPKPSDPTSPLFTPSEIVNFYKKNGPQIFKSSWWPTCPKYDGKVLRDLAHHILNETRLSQALTNVVIPTFDQKQLKPITFSSFKAMVAVSEVLQSSEQLREIVLLSLGTGKPKKEDLSSIHNDVCQGWWLVHNLDVLDETIFRTDQIHYYLATVFPGLLPADNYLRIQEYNLDPSMNEMDNADEDNMRNLETAGNSLLKENVKRVNVNTFTPYELNYTNADALDRLADRLYEERQLRLKRKFMENEESQAIKTVKLSSRKRPLTMVDLDTQDPTTSLADYFDVMTGTSTGGLISQNAKRMNVNTFIPYEIYGKNVEVLDSQLMAGFNAQLPPLLPPPSYGNYTTILSIDGGGIRGIIPATVLEHLHKALKAKDPTASLAHYFDVIAGTSTGGLVSVMLAAPDPDNDNRPLFTPSKIVKFYKDNGPQIFDSGLIPTCPVYDGVYLRDITHKMLKETRLNQTLTNVVIPTFDQKKIKPVTFSNYKRKTETYLNAKLSDICIGTSAAPSYLPSHQFVNEGVEFDLIDGGVTANNPALVAVSEVIQHSEEKEMLLLSLGTGIPRKQDLTSIHQDLCKAEWIVESADVVTESMFRTNQIHYYLATVFPGLLPAHNYLRIEEYNLDPSMKDMDNADKDNMDNLEKVGKKLLQEKVKRMNVNTFIPYELDQTNAKALDRLAEKLYAERQLRLRRKSMENGGSRTIKTS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00190 776 FunFam Patatin 411 765 - -
Pste7g00190 776 Pfam Patatin-like phospholipase 421 611 IPR002641 GO:0006629
Pste7g00190 776 Pfam Patatin-like phospholipase 22 143 IPR002641 GO:0006629
Pste7g00190 776 SUPERFAMILY FabD/lysophospholipase-like 417 737 IPR016035 -
Pste7g00190 776 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 421 612 IPR002641 GO:0006629
Pste7g00190 776 SUPERFAMILY FabD/lysophospholipase-like 18 288 IPR016035 -
Pste7g00190 776 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 22 215 IPR002641 GO:0006629
Pste7g00190 776 Gene3D Cytosolic phospholipase A2 catalytic domain 12 159 - -
Pste7g00190 776 Gene3D Cytosolic phospholipase A2 catalytic domain 412 765 - -
Pste7g00190 776 Gene3D Cytosolic phospholipase A2 catalytic domain 160 318 - -
Pste7g00190 776 PANTHER XYLOSE ISOMERASE 174 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00190 Pste-Chr7 1784771 1808923 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00190 409 759 Miscellaneous Gene Families AT2G26560 41.645 7.40e-78 255