Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00187 TCTATAAATACCCTTCACATGGAGAGGATTATACACCCTTCACGTCTATTCTCTCTGTCTCCTCAAACTTTTGATCATTCAATGGCTCCATTTCTCTTGTTTGCTTTGGTGCTGGCTAGCCAACTAATGGCTGCATTCAATGCACCTTTACCTTTACCACCTCCGTCCTATGGAAATCATGTAACAATTTTGAGCATAGATGGTGGTGGTATTAGAGGGATCATTCCCGCAGCTGTTCTTGAGCACTTGGACAAGGCTCTTAAGAAAAAGGATCCAACAGCATCTTTAGCACATTATTTTGATGTGATATCAGGAACTAGTACTGGTGGAATCATGACTGCTATGTTAGCAGCTCCACGCTCACCTCGTTCTAACATTCCTCTCTTTACTCCATCGGAAGTCATACAATTCTACAAGAATTATGGCCCTAGCATATTTGATAAAGGATTGCTTCCATCATGCCCCAGGTATGATGGAAAATTCTTACGAGATATAGCTCGTCAGATATTGAAAGAAACACGACTGAATCAAACAATTACAAATGTGGTAATACCAACTTTCGATGCGACTACAATCAACCCAGTTATATTCTCAAACTATCAGCTAAGGACAGAAACTTACATGAATGCCAAACTCTCAGATATATGCCTTGGAACTTCGGCTGCACCAACTTATCTACCAGCACACAAATTTACTAATGATGGTGTTAAATTTAATTTGGTCGATGGTGCTATGGCTGCTAATAATCCAGCTATGGTTGCTGCGACGGAAGCAGTGCGACACACTCCTGGAAAAAAAGACATATTGATGCTCTCATTAGGAACTGGAACAATAAAACCTAAGAATATGTTAACTGGTGTAATCTTTGATGTGTTGTGTGCATCTGGGTGGCTAGTTCAGAATAAAGATGTTTTGAGTGAGGCTATTTATAGCACAGACATGATCTATTACTACCTTGCCTCAGAATATGACCTGAATCCTGCCAACGAAGCAATGGATAATGCTAATAAGAGAAACATGGACCAACTTGAAATCATAGGAAAAGCCCTGTTGCAACAAAAAGCTAAGAAGATGGATGTAAATAATTTTATCCCATATGAATTGAACTACACAAATGCTCAAGCTCTTGACAGGTTGGCTGAGAAATTATATGCAGAGAGGCAGTTGCCATATATGGCTCGTTTTCTTCTCTTTGTTTTGCTATTTGCTACTCAACTGATAGCAGGATTCAGTACCCGTCTTCCTCCATCCCAAAATGGTGAAACGATAACTGTTCTCAGCATTGACGGTGGGGCTATTAAGGGCATTATTCCAGCAGTGATTCTTGATCACTTAGACAAAGCTCTTAAGAAAAAGGATCCAAGTAAACCTCTAGCACATTATTTTGATGTGATAGCAGGGACAAGCACTGGAGGACTTATAACTGCTATGTTAGCCAGCCCAAGCCCTAATGACCCTCAAAATCCAGTATTTACTCCTGCTAAAATCGTAGATTTCTACAAGAACTTTGGCCCTTCAATATTCAATACAACTGGCAGTGGCGATGGTGTCTTCGATCCCCGTCCAATGTTTGATGGGGAGTTCTTACATAACATTACTGCTGAAATATTGAAAGACACACGACTCAGTGATACATTGACAAATGTTGTAATCCCAACTTTCGATCTGAAGAAACAACAGCCTGTTATATTCTCAAACTACAAGCTTAAGAAGGTTCCCTACTTAGATGCCAAGATGTCGGATATATGCATAGCAACATCAGCTGCACCCATTGCTCTACCACCCTACTTCTTTGAGAACGATGGTGTTGAGTTCAATATGATTGATGGTGGTGTAGCCGCCGGTAATCCGACGGAAGCTGCAATCAGTGAAGTTATGCAACACAACGACTATACCAAAATCCTGCTACTTTCATTAGGGACTGGAGTAACAAGACTTAATGAAAGCTATAACGTTGAAGATGCTACTACATGGAATGGACTCAGATGGTCATTGATACTTGCGAAAGAATTAGGTCCTCGTGCTTCAACATACATGACTGAATATTATCTGAGCACAGTTTTCTCACGCCTACAACCTACTACAAATTATCTTCGAGTTCAGGAATATGACCTGGATCCTTCCATGTCTAAGGATATTAATGTTACAAAAGAAAACTTGGACAATCTTGAAAAGGAAGGGAAAGAACTGTTGCAAAAAAATGTTGTGAGGATCAATCTGGATACATTTGATTTTGAAGAAACAAATGAGGGTACATATGCTGAGGCTCTTGAC 2274 0.4011 SINTLHMERIIHPSRLFSLSPQTFDHSMAPFLLFALVLASQLMAAFNAPLPLPPPSYGNHVTILSIDGGGIRGIIPAAVLEHLDKALKKKDPTASLAHYFDVISGTSTGGIMTAMLAAPRSPRSNIPLFTPSEVIQFYKNYGPSIFDKGLLPSCPRYDGKFLRDIARQILKETRLNQTITNVVIPTFDATTINPVIFSNYQLRTETYMNAKLSDICLGTSAAPTYLPAHKFTNDGVKFNLVDGAMAANNPAMVAATEAVRHTPGKKDILMLSLGTGTIKPKNMLTGVIFDVLCASGWLVQNKDVLSEAIYSTDMIYYYLASEYDLNPANEAMDNANKRNMDQLEIIGKALLQQKAKKMDVNNFIPYELNYTNAQALDRLAEKLYAERQLPYMARFLLFVLLFATQLIAGFSTRLPPSQNGETITVLSIDGGAIKGIIPAVILDHLDKALKKKDPSKPLAHYFDVIAGTSTGGLITAMLASPSPNDPQNPVFTPAKIVDFYKNFGPSIFNTTGSGDGVFDPRPMFDGEFLHNITAEILKDTRLSDTLTNVVIPTFDLKKQQPVIFSNYKLKKVPYLDAKMSDICIATSAAPIALPPYFFENDGVEFNMIDGGVAAGNPTEAAISEVMQHNDYTKILLLSLGTGVTRLNESYNVEDATTWNGLRWSLILAKELGPRASTYMTEYYLSTVFSRLQPTTNYLRVQEYDLDPSMSKDINVTKENLDNLEKEGKELLQKNVVRINLDTFDFEETNEGTYAEALD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00187 758 SUPERFAMILY FabD/lysophospholipase-like 60 366 IPR016035 -
Pste7g00187 758 Coils Coil 713 733 - -
Pste7g00187 758 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 426 622 IPR002641 GO:0006629
Pste7g00187 758 FunFam Patatin 54 394 - -
Pste7g00187 758 PANTHER XYLOSE ISOMERASE 412 753 - -
Pste7g00187 758 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 64 255 IPR002641 GO:0006629
Pste7g00187 758 Pfam Patatin-like phospholipase 64 254 IPR002641 GO:0006629
Pste7g00187 758 Pfam Patatin-like phospholipase 426 622 IPR002641 GO:0006629
Pste7g00187 758 Gene3D Cytosolic phospholipase A2 catalytic domain 55 392 - -
Pste7g00187 758 Gene3D Cytosolic phospholipase A2 catalytic domain 413 758 - -
Pste7g00187 758 FunFam Patatin 416 758 - -
Pste7g00187 758 SUPERFAMILY FabD/lysophospholipase-like 423 742 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00187 Pste-Chr7 1696521 1711259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00187 414 757 Miscellaneous Gene Families AT2G26560 42.708 1.38e-80 262