Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00156 ATGAACCCTCATGCTTTGAACACCAACATGAATGCCCTTGATCATTTTGATTTTGAGATATCTGTAACGACACCGTTTAAGGATGCTTCCACGTCGGTGCCGGCGTTGTGCCGGAACTCCAGCTTCCGGAACCTTTTCTTGGGGGAGAACTGGGCGGAGCTGCCGCTGAAGGAGGACGACGCCGACGACATGGTAATCTACAGCGCTTTGCGTGAGGCTGCCACCACCGGATGGTTCCCCGCCAATGGCAATGAGGTGAGTAACGTTGGTGTTGCCATGAAAATGGGAAACAAGGGTCAAAATAGTGAAACTGGAGCGGCGCGTGGTACTCACGCGCCACCGAGGAGGGGGTTGAGCTACCGGGGCGTGCGTAGGAGGCCGTGGGGGAAGTATGCGGCGGAGATAAGAGACGCCATGAGAAACGGTGCGAGGGTGTGGCTTGGAACCTATGAAACAGCTGAAAATGCAGCTTTAGCTTATGATCGAGCCGCGTTCAAAATGCACGGCTCCAAAGCCAAGCTGAATTTTCCTCATCTAATTGGCTCACATAATGAGCCAATTGGGACTAGCTTAGGGAAACGTTCAGGGAATGTTTCTTTGTCATCATCGAAAGTGGCTGCAAAGAGGATTAAGGATGGCTCTTTGCCACATTTGGAGCTGAATGACTCAAACATGTTGCAGTTTTCCATAGACACTGCCAATGATAATAATAGGTAA 717 0.5091 MNPHALNTNMNALDHFDFEISVTTPFKDASTSVPALCRNSSFRNLFLGENWAELPLKEDDADDMVIYSALREAATTGWFPANGNEVSNVGVAMKMGNKGQNSETGAARGTHAPPRRGLSYRGVRRRPWGKYAAEIRDAMRNGARVWLGTYETAENAALAYDRAAFKMHGSKAKLNFPHLIGSHNEPIGTSLGKRSGNVSLSSSKVAAKRIKDGSLPHLELNDSNMLQFSIDTANDNNR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00156 238 MobiDBLite consensus disorder prediction 99 120 - -
Pste7g00156 238 CDD AP2 120 179 IPR001471 GO:0003700|GO:0006355
Pste7g00156 238 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
Pste7g00156 238 PANTHER DNA-BINDING DOMAIN 87 193 IPR044808 GO:0003700|GO:0009873
Pste7g00156 238 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Pste7g00156 238 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
Pste7g00156 238 Gene3D AP2/ERF domain 119 178 IPR036955 GO:0003700|GO:0006355
Pste7g00156 238 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Pste7g00156 238 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Pste7g00156 238 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
Pste7g00156 238 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00156 Pste-Chr7 1397535 1398251 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00156 38 231 AP2-EREBP Transcription Factor Family AT2G44840 47.739 1.09e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00156 AP2 7.8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00156 7 1397535 1398251 Pste7g00156 7 1397535 1398251 ECH