Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00153 ATGGCCAATGATTTTTGTTCAGGTGTTCCAATGTACGAGATTCAACATGATTCCAACACTCTCGTGAATGTTTCCCACCACGACACCTTTTATTGTTCCTCGTACAACAATCCGTTTCCGAACCCTACCCATGTCCATGACACAACACAATCATTTGCATGCAACACGGAATCGCCAGGAGCAGCGCGTGAGGTGCATGCGCCGCCGAACTGGACTCGTTTCAGGGGCGTGAGGCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATATGGGAGCCGAAGCAGAAGCATGGGAGGGTTTGGCTCGGGACGTTTGATACTGAAGAAGAAGCTGGCTTGGCTTATGATAGAGCTGCTTTTAAGATGAGAGGTAGCAAGGCAAAGTTGAATTTTCCTCACTTGATTGGCTCCCACGCGCCGCCGGAGAGAGTGGGTGTGGCGCCGGCTTCGGAGTCGAACTCGCTGGAGCCTTGTGAGCCGGTGATGGATAGCCCACAGCCACAAGAATCTAAGAAAAAGAGGAATCTTGCTGATTTGCTTAATAGGTTAGCCAAGAAGAGAAGCCAAAGTACGAATCTCAATTGA 582 0.5155 MANDFCSGVPMYEIQHDSNTLVNVSHHDTFYCSSYNNPFPNPTHVHDTTQSFACNTESPGAAREVHAPPNWTRFRGVRRRPWGKFAAEIWEPKQKHGRVWLGTFDTEEEAGLAYDRAAFKMRGSKAKLNFPHLIGSHAPPERVGVAPASESNSLEPCEPVMDSPQPQESKKKRNLADLLNRLAKKRSQSTNLN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00153 193 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Pste7g00153 193 Pfam AP2 domain 72 123 IPR001471 GO:0003700|GO:0006355
Pste7g00153 193 Gene3D AP2/ERF domain 72 132 IPR036955 GO:0003700|GO:0006355
Pste7g00153 193 MobiDBLite consensus disorder prediction 133 193 - -
Pste7g00153 193 PRINTS Ethylene responsive element binding protein signature 113 133 IPR001471 GO:0003700|GO:0006355
Pste7g00153 193 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pste7g00153 193 FunFam Ethylene-responsive transcription factor 2 72 132 - -
Pste7g00153 193 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Pste7g00153 193 PANTHER DNA-BINDING DOMAIN 56 170 IPR044808 GO:0003700|GO:0009873
Pste7g00153 193 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Pste7g00153 193 MobiDBLite consensus disorder prediction 165 180 - -
Pste7g00153 193 CDD AP2 72 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00153 Pste-Chr7 1345102 1345683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00153 66 136 AP2-EREBP Transcription Factor Family AT2G44840 70.833 3.81e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste7g00153 AP2 8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00153 7 1345102 1345683 Pste7g00153 7 1345102 1345683 ECH
Pste7g00153 7 1345102 1345683 Pste5g00990 5 6489181 6489693 PCT