Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00149 ATGAACTCCATAATATCCTGTGATTTCTCTTCATTTGAATATATTCAACACTATCTTCATGAACTTGAACGCAGTTCCAACACTCTCACTAGTGTTTCCAACCACTACATGTGTTATTCTCCGACGTACTATACATCTCCAAGCCCTACGTTATGCTTGGAGGGTGTTCATGATCCAAAGGATTCTTTAGCATGCAAAAAAGAACACCCTAAGGTGGAGCGTGAAGCTCACGCGCCGCCGGTGTGGAAGCACTACCGGGGCGTGAGGCGTAGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGACCCAAAGAAGAATGGTTCAAGGATTTGGCTTGGAACATACGAAAATGAAGAGGAGGCAGGTTTAGCTTATGATAGAGCTGCTTTTGAGATGCGTGGTAGCAAAGCTAAATTGAATTTTCCTCATCTCATTAGCTCTCACGCGCCTGTGAAGCCGGTGAACAAGATGAATAGATGTTGGTCTTGTTCACCAGTTTCAGAGACCCGTGGGTCTCAGAAAAGAAAAAACATGGTTGATTTGTTGAACAAGTTGGCCAAGAGTAGAAGGCAAGTGAAGGTATTTGAAATGGGTTTACATGCAGAGGATTTTGAGGTTGATGTTGATGATGAATGGTGGAGGAAGTTGAATGAATATGTTGTTGTGTAA 669 0.4425 MNSIISCDFSSFEYIQHYLHELERSSNTLTSVSNHYMCYSPTYYTSPSPTLCLEGVHDPKDSLACKKEHPKVEREAHAPPVWKHYRGVRRRPWGKFAAEIRDPKKNGSRIWLGTYENEEEAGLAYDRAAFEMRGSKAKLNFPHLISSHAPVKPVNKMNRCWSCSPVSETRGSQKRKNMVDLLNKLAKSRRQVKVFEMGLHAEDFEVDVDDEWWRKLNEYVVV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00149 222 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Pste7g00149 222 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 PRINTS Ethylene responsive element binding protein signature 124 144 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 PANTHER DNA-BINDING DOMAIN 69 202 IPR044808 GO:0003700|GO:0009873
Pste7g00149 222 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 CDD AP2 83 144 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Pste7g00149 222 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Pste7g00149 222 FunFam Ethylene-responsive transcription factor 2 83 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00149 Pste-Chr7 1310144 1310812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00149 84 180 AP2-EREBP Transcription Factor Family AT2G44840 62.626 3.88e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00149 AP2 4e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00149 7 1310144 1310812 Pste7g00149 7 1310144 1310812 ECH
Pste7g00149 7 1310144 1310812 Pste5g00989 5 6471886 6475060 PCT