Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00148 ATGAATTTCAACACCCCTTTTAAATCCGATGATGATGTTGCTCTTCTACAATCCATTCAACGTTACCTCCTTGATGATAACCGAGACTTCAACACTCTAACGGAAATTTTAGCCACCCCTAACGGTGTTGGTGAATCAACCTCCCCCGTTAACTCTCCCTTAGCTTTCTCCGGACAGACATCAACGGCTGCCACGGCGGCGCGTGGTGTACAAGCGTATATCCAAAATTACAAGGGAGTGAGGCGTAGGCCTTGGGGGAAGTTTGCGGCTGAGATAAGGGACCCCAATAGGAACGGCGCGAGGGTGTGGCTTGGGACTTATAACTCGGCTGAGGATGCGGCTTTGGCTTATGACCGAGCCGCCTTTCAAATGCGTGGCTCGAAAGCTAAGCTGAATTTTCCTCATTTAATTGGGTGCAATGATGCTGAGCCGAGCCGAATGCGCTAA 447 0.5011 MNFNTPFKSDDDVALLQSIQRYLLDDNRDFNTLTEILATPNGVGESTSPVNSPLAFSGQTSTAATAARGVQAYIQNYKGVRRRPWGKFAAEIRDPNRNGARVWLGTYNSAEDAALAYDRAAFQMRGSKAKLNFPHLIGCNDAEPSRMR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00148 148 Pfam AP2 domain 76 126 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 FunFam Ethylene-responsive transcription factor 2 75 135 - -
Pste7g00148 148 Gene3D AP2/ERF domain 75 135 IPR036955 GO:0003700|GO:0006355
Pste7g00148 148 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 CDD AP2 75 136 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Pste7g00148 148 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Pste7g00148 148 PANTHER DNA-BINDING DOMAIN 61 135 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00148 Pste-Chr7 1302599 1303045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00148 24 148 AP2-EREBP Transcription Factor Family AT2G44840 56.250 2.38e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00148 AP2 1.4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00148 7 1302599 1303045 Pste7g00148 7 1302599 1303045 ECH