Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00133 CAAAAAGCTAATTTGCCTTGTGACACCCATTTTGCTCCTCTCTTTACCACACAACAATGAGTGAGAAAGATGATGACTTGAGTTTGGGATTGAGTTTGAAGCTTGGATGGGGAGAAGATGATAACAACAATAAGAAAAATAATAATCTTAATCTTAATCAACACCCTTTCAACATGCACAAACTTCCTCAATCATTTCCAAACCAAAGGCCTTCCTTCAACAACCTGTTCCATTTTCAAGATCGGAGCTCTGAGTCACGGTCATTTTCCCGCGGAATCGATGTGAACTTGCTTCCGGGGCCGTTGGCGGCGGCGGCCATGGTGTTTGACGAGGAGAACGCTGTTTCGTCGCCGAACAGCACGATATCGAGCATCAGCGGCAAGCGCAGCGAGAGAGAGGGCAACGAAGAGGAGAATGAGAGAGGGTCATGTTCTCGCGGCGGAAGTGATGACGATGACGGCGGCGCGTGCGGCGGAGACGGCGACACGTCGAGGAAGAAGCTGAGGCTTTCCAAGGAACAGGCTTTGGTGCTGGAGGAAACATTCAAGGAACACAACACTCTGAATCCAAAGCAAAAGCAAGCTTTGGCAAAGCAGCTGAATCTGATGCCTAGACAGGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAGACTGAAGTGGATTGTGAATATTTGAAAAGGTGCTGTGAGAATCTAACTGAAGAGAATAGGAGGTTGCAAAAGGAAGTGCAAGAGCTTAGGGCATTGAAGTTATCCCCACAGCTATACCGGCACATGAACCCTCCCACCACTCTTACAATGTGTCCTTCATGTGAGCGTGTTGCTGTCTCATCTGCATCCTCTTCCTCATCGCCTGCCACGCCCTCTGCTCTGCCTCCGGCTAATCTCAACCCGTTAGGCCCTACCATCCAGCGGCCGGTGCCCGTCAACCCTTGGGCGGCAATGATGAATCAGCACCGTGGCCGACCATAATTGTGCACTCCGGCCATGGCGTAGGGTAAAGTTCAGGATGGAAGCTATGACATTTTAGACTTGCTAGACAGAAATGAATCTTATGTGTTGGTTTACTTATTAGGTAGGACTTGTCATGGTTTGGAAAATTTTATTTGCACCCCGTCCTTTTTTTTTATTGCACTTTTTTATTTTTATATTTAGGAATTGGTTTTCAGAATGGGCAATACAGTTTTGGAAATTAGTTTCTAGAATATGAACAATACAATTCTAGAAATACATTCCAGAAACTAATTTTGTGGAAGGTAAAGAAAAAGTGGCTATCTTCAAGAGAAAAAACGGGTGCAATTAGAATCTCCATGATGATTTTGGTTATAAACTTTTTTGTCTAGGCTTAGTTTTGCATTGAGACTAGATAGAACATGCTTTAGTCAACTTTAGGATGTGTAAAGTTTGGATATGTTAAAGCAGTTAGTGTTTTCATACGGAGAACAGTGTTTGTTAACCTTGGAAAGATGGAAAAGGGAATTGGAATCTATTTTATTATATTTAATTATTTCCTTTTCATAGGATTTGTGATGCCACATGATGAGAAAGGTGGGATTTTGTGCAAAATAGGGGAAGGGACAAAACAAGGGGATTCCCATGAAGGGATAATGAGTATGGTCTCAATTAGAAATGATTTTGTCTAACTTTTGCTCTGATTCCCATCTTTTTTGGTCTAATATGCTTGGACATGGGTTTGGGTGAGTCAGAGTGTGGGACTCAACTTTGTTTGGTTGTGCACTTCATTCTCCTTAAGATGTGGATTTCCATTACTATACAGCAACAAGTGAACACCAAAGGTAAATGTGGCTACCCACTAGTGAGTAGTGACATTGGTTGTATCATCACGTGTGTGTGCCTTTCAAAGTAAAGTTTTCAAAGGGAAGCTAATAACTAG 1908 0.4308 MSEKDDDLSLGLSLKLGWGEDDNNNKKNNNLNLNQHPFNMHKLPQSFPNQRPSFNNLFHFQDRSSESRSFSRGIDVNLLPGPLAAAAMVFDEENAVSSPNSTISSISGKRSEREGNEEENERGSCSRGGSDDDDGGACGGDGDTSRKKLRLSKEQALVLEETFKEHNTLNPKQKQALAKQLNLMPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYRHMNPPTTLTMCPSCERVAVSSASSSSSPATPSALPPANLNPLGPTIQRPVPVNPWAAMMNQHRGRP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00133 309 SUPERFAMILY Homeodomain-like 131 203 IPR009057 -
Pste7g00133 309 Gene3D - 139 207 - -
Pste7g00133 309 MobiDBLite consensus disorder prediction 265 293 - -
Pste7g00133 309 CDD homeodomain 146 203 IPR001356 GO:0003677
Pste7g00133 309 FunFam Homeobox-leucine zipper protein 18 131 207 - -
Pste7g00133 309 ProSiteProfiles 'Homeobox' domain profile. 142 202 IPR001356 GO:0003677
Pste7g00133 309 MobiDBLite consensus disorder prediction 110 129 - -
Pste7g00133 309 Coils Coil 208 238 - -
Pste7g00133 309 MobiDBLite consensus disorder prediction 95 148 - -
Pste7g00133 309 SMART HOX_1 144 206 IPR001356 GO:0003677
Pste7g00133 309 Pfam Homeodomain 146 200 IPR001356 GO:0003677
Pste7g00133 309 SMART halz 202 245 IPR003106 GO:0006355|GO:0043565
Pste7g00133 309 MobiDBLite consensus disorder prediction 95 109 - -
Pste7g00133 309 Pfam HD-ZIP protein N terminus 1 114 IPR006712 GO:0005634
Pste7g00133 309 MobiDBLite consensus disorder prediction 14 34 - -
Pste7g00133 309 Pfam Homeobox associated leucine zipper 202 236 IPR003106 GO:0006355|GO:0043565
Pste7g00133 309 ProSitePatterns 'Homeobox' domain signature. 177 200 IPR017970 GO:0000981|GO:0006355
Pste7g00133 309 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00133 Pste-Chr7 1171822 1176731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00133 44 301 Homeobox Transcription Factor Family AT3G60390 63.469 2.73e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste7g00133 HD-ZIP_N 7.8e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00133 7 1171822 1176731 Pste7g00133 7 1171822 1176731 ECH
Pste7g00133 7 1171822 1176731 Pste5g00962 5 6326309 6329840 PCT