Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00114 ATGACCGAGTACCGGTCGCCACCGCCGCCGATGAATCTCTGGACAGACGACAACTCCTCTGTGATGGAGGCATTCATGAGCTCCTCCGACCTCTCGTCGCTCTGGCTGCCGCCGCCGCAGTCCGCGGCGTCCACGACCGACGGCGCGAGAGAGGCGGCGGCGGTGGCGCCGCTCCTGAACCAGGAGACGCTCCAGCAGCGGCTCCAGGCACTAATCGAAGGGTCACGAGAGAGTTGGACCTACGCCATCTTCTGGCAATCCTCCTACGACTATTCCTCGAGCGCCACGCTCCTCGGGTGGGGCGACGGTTACTACAAAGGCGAAGACGACAAAGCGAAGGGCAAAGCCCCCAAAACGACGTCGTCCTCCGCCGAACAGGACCACCGCAAAAAGGTCCTCCGCGAACTGAATTCCCTAATCTCGGGCCCCTCCGCCTCCCCCGACGACGTCGACGAGGAAGTCACCGACACCGAGTGGTTCTTCCTCGTTTCCATGACTCAGTCCTTCCCCAACGGCACGGGCCTCCCGGGCCAGGCTTTTTTTAATTCCGCCCCCGTTTGGGTCGCCGGGCCCGACAGCTTATCCGAGTCCGCCTGCGAACGGGCCCGCCAGGGCCAGGTCTTCGGCCTCCAGACTCTCGTTTGCGTTCCCGCTGCAAACGGCGTCGTCGAGCTCGCCTCCACTGAGGTCATTTTTCAAAACCCTGATTTGATGAACAAGGTTAGGGATTTGTTCAACTTCAATAACAACCACAACCCCGATTCCGGTTCTTGGCCGTTGAACTGCGTCGCAACCGATCAAGGTGAAAATGACCCTTCTGACCCTTCCTCGCTCTGGCTCAATCCTTCTTCCTGTCTCGAAATTAGGGATTCCGCTGCCAACACTGTTGCACCTGCAAATGATGCTGCAGCAAACAAGGCGCTGCAAATGCAATTTGCAGCCACCGCCGCTACCCCTGGTTCTAGTACTTTAACAGAAGCCCCTAGTGCTGTTCATGTTTCGAACCCTAAAAACCAGGGTTTCTTCTCTCGGGAATTGAATTTCTCGAATTGTTTGAAACCTGAATCTGGCGAAATTCTGAGCTTTGGAGAAAGCAAGAAGAGCTCTTACAATGGGAATTTCTTCCCTGTGGTTGCGGCTGAGGAAAACAGTAAAAAGAGAAGGTCTCCTGTTTCTCGGAGCAACATTGATGATGGCATGCTTTCATTCACTTCGTGTGTGATCATGCCGGGGTCTAATGTAAAACCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTAATGGTGGTGATTCTGATCATTCTGATCTTGAAGCTTCTGTGGTGAAGGAAGCTGTGGTTGAACCGGAGAAACGCCCCCGGAAAAGGGGGCGGAAGCCGGCGAATGGAAGAGAGGAGCCGTTGAATCATGTCGAGGCAGAGAGGCAAAGGAGAGAAAAGCTGAACCAAAGGTTCTATGCTCTTAGAGCAGTGGTTCCTAATGTGTCCAAGATGGACAAGGCATCACTGTTGGGTGATGCCATATCTTACATAAATGAATTGAAATCAAAGCTCAACGGGCTTGAATCAGAGAAAGGGGAATTAGAGAAGCAATTGGGTTCTGCAAAGAAAGAGCTTGAACTCTCCACCAAAAGCCCTCCTCCTCCGCCGCCGCCGCCACCACCCCCACCAACGGAAAACGAATCAAAGAAAACGACGACCTACAAACTCGTTGATTTGGAGATAGAGGTGAAGATTATAGGGTGGGATGCAATGATAAGAATCCAGTGCAGCAAGAAGAACCACCCTGCTGCAAGGTTGATGGCAGCGTTGAAGGACCTGGACCTGGAAGTGCACCACGCAAGTGTTTCAGTGGTGAATGATTTGATGATCCAACAAGCCACCGTGAACATGGGAAACAAGTTTTACACGCAGGAGCAGCTTCTGTCGGCACTCACTTCCAAAGTTGGAGAAGAAGAAGCACGATAG 1971 0.5383 MTEYRSPPPPMNLWTDDNSSVMEAFMSSSDLSSLWLPPPQSAASTTDGAREAAAVAPLLNQETLQQRLQALIEGSRESWTYAIFWQSSYDYSSSATLLGWGDGYYKGEDDKAKGKAPKTTSSSAEQDHRKKVLRELNSLISGPSASPDDVDEEVTDTEWFFLVSMTQSFPNGTGLPGQAFFNSAPVWVAGPDSLSESACERARQGQVFGLQTLVCVPAANGVVELASTEVIFQNPDLMNKVRDLFNFNNNHNPDSGSWPLNCVATDQGENDPSDPSSLWLNPSSCLEIRDSAANTVAPANDAAANKALQMQFAATAATPGSSTLTEAPSAVHVSNPKNQGFFSRELNFSNCLKPESGEILSFGESKKSSYNGNFFPVVAAEENSKKRRSPVSRSNIDDGMLSFTSCVIMPGSNVKPGGGGGGGGGGGGNGGDSDHSDLEASVVKEAVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLNGLESEKGELEKQLGSAKKELELSTKSPPPPPPPPPPPPTENESKKTTTYKLVDLEIEVKIIGWDAMIRIQCSKKNHPAARLMAALKDLDLEVHHASVSVVNDLMIQQATVNMGNKFYTQEQLLSALTSKVGEEEAR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00114 656 FunFam Transcription factor bHLH13 459 533 - -
Pste7g00114 656 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 64 245 IPR025610 -
Pste7g00114 656 MobiDBLite consensus disorder prediction 527 567 - -
Pste7g00114 656 MobiDBLite consensus disorder prediction 544 561 - -
Pste7g00114 656 Pfam Helix-loop-helix DNA-binding domain 470 515 IPR011598 GO:0046983
Pste7g00114 656 MobiDBLite consensus disorder prediction 437 476 - -
Pste7g00114 656 MobiDBLite consensus disorder prediction 108 128 - -
Pste7g00114 656 CDD bHLH_AtAIB_like 463 539 - -
Pste7g00114 656 Coils Coil 512 539 - -
Pste7g00114 656 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Pste7g00114 656 SMART finulus 472 521 IPR011598 GO:0046983
Pste7g00114 656 MobiDBLite consensus disorder prediction 412 476 - -
Pste7g00114 656 SUPERFAMILY Formin homology 2 domain (FH2 domain) 548 586 - -
Pste7g00114 656 Gene3D - 458 545 IPR036638 GO:0046983
Pste7g00114 656 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 534 IPR036638 GO:0046983
Pste7g00114 656 PANTHER MYC 23 649 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00114 Pste-Chr7 988437 990407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00114 1 651 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.720 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00114 bHLH-MYC_N 3.7e-53 CL0161