Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00110 ATGAGCACAGGGGAAGGGAAGTTTGGTAGATGCAAATGGCCAAATCCACTTTCATTGTCCCTCTCCGTTGAGAACCTGAAAGAAGACGTAATAGTGTCATCACCCAAAGGCACTTTCACTGCAGGCTTTTACCCTGTAGGGGATAACGCATACTGCTTCGCCATATGGTACACCCAACAACCTCAAACCCTTGTGTGGATGGCCAACCGGGACCAACCGGTTAACGGAAAACGCTCTAAGCTTTCACTTCTGGACATCGGTAACCTCGTACTAACCGACGCGGACCAGTTCCAGGTGTGGTCCACCAACACCGTGACATCATCTGATAAAGTCCAGTTAAGTTTGTACGACACCGGCAACCTGGTTCTCCTCGACAACTCCAACCATTCCTCACCCCTTGTTCTGTGGCAGAGCTTCGATTTTCCAACGGACACGCTTCTTCCCAATCAGCCTCTCAGCGAGAACACCAACCTCATTTCCTCCAGAAGCGGTACAAACTATTCCTCTGGTTTCTACAAACTCTTCTTTGACTCCGAGAATGTTCTGCGCCTCATGTACCAAGGCCCTCGTGTTTCCAGCGTTTACTGGCCATATGCTTGGCTTCAGAACAACAACTTCGGTAATGGTAACGGTAGATCCACTTACAACGATAGCCGGGTTGTTGTGCTCGATGATTTTGGCAAACTTGTTTCTTCCGATAACTTCACTTTCACCACAACTGATTATGGCATCATGCTTCAACCTAGATTGACCCTCGATCATGACGGTAATGTCAGGCTCTATAGCATCCAAGATGGACAACACAAGTGGTCTGTATCAGGAATATTTCGACTACAACCTTGTTTTATTCACGGTATTTGTGGACCCAACAGTTATTGCAGTCATATCCCCACAACTGCAAGAAAGTGTTCCTGCCTTCCAGGATATAGATGGATTGATAGTGAAGATTGGTCTCAAGGTTGCGAACCGAATTTTCAGCTTTGGTGCAACAACAACAACAAGACTGAGCAAGAGTTTAGCTTCCTGCGCTTACCGGAGGTTGATTTTTACGGATATGACTATGGCCTCCTTCAGAATCAAACGTACCAACAATGTGCTGATCGGTGCTTGGAATTGTGCCAATGTAAAGGGTTTCAACACAGTTTTTCAGGGGGAAATGGGGACAGTGGTCAGTGCTACCTGAAAACGCAGTTGTTAAATGGGCATCACTCACCAGGTTTCTCAGGAGCATTCATGCTACGAGTGCCTTTGTCCCAAGACTATGATGAGAGTGAGAGGGCCATTGGCTTGGTTTGTGGGGGAAGTAGTAATGGAAAGGAGAATTTTCTAGAGAGACCATATGTGGAAGAAAAAGAAAATGGATCTTTGAAGTTCATGTTGTGGTTTGCGATTGGCTTGGGAGTAATTCAGTTGGTTTGCATCTTTTTGGTGTGGTGTTTTCTGTTGAGGGAAAACAGGACCTTGGACCCCATAGATGACAAACATGGCTATGTTCTTGCGGCGGCAACGGGGTTTAGGAAATTCAGTTATTCTGAACTGAAACAAGCCTCCAAAGGTTTTAGTGAAGAGATAGGAAGGGGTGGTGGGGGTACTGTGTATAAGGGCGTCTTGTCTGATGATCGAGTTGTGGCCATAAAGCGACTGCATGAAGTAGCAAACCAAGGAGAAAGTGAGTTTTTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTTGGGCTATTGTGCTGAGGGTAAGTATAGGTTGTTGGTCTATGAGTACATGGAGAATGGTTCTTTAGCTGAAAACCTTTCATCGACTTCAAATGTACTTGATTGGAGTAAGAGGTATAATATTGCTCTGGGAACAGCAAGGGGTTTGGCCTACTTACATGAAGAATGCTTGGAGTGGGTTTTGCACTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGATTATAAACCAAAGGTGGCAGATTTCGGCTTGTCTAAGCTACTAAACCGGAGTAGCAACGTGGACAATTCAAGCTTCTCGAGAATAAGAGGAACAAGAGGATACATGGCACCAGAATGGGTTTTCAACTTGGCAATAACTTCAAAGGTGGATGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGAAGGAGCCCAACAACAGGGGTCCAAATCACAGAAATAGAAGCAAAGTCACCCCATCACGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGAAGAAAGGATCAGAAATGGGGTCATTTTGGGTGGATCAAATTGTTGATCCAACTTTGGGGTTAAACTATGACATGAATAAGATGGAGATATTGGCAACGGTGGCTTTGGAATGTGTAGAGGAAGAGAAGGACGTGAGACCAACCATGAGTCAAGTTGCTGAGAGGCTACTAAGTGCATTCTCCCTGTCCGTGGAGAAGCTGATAGAAGAAGTAATAGTGTCATCACCCAATTTCCAACTTTGGTGTAACAAGACACGAGCAAGAGTCTCGTTGATTTTTACGGTTATGACTATCGCTTCATCCAAAATCACACGTACCAATAATGTGCATGTGAATCTATGTTTGAAGTTGTGCGAATGCAAAGGGTTTGTACATGGCTATTCAGGGCAAGGAGGCAGTGGAGAGTGCTACTTGAAGACACAGTTGTTAAATGGACATCGTACACCAGGTTTTTCGAAATCATTCATCTTGCGACTGCCTTTGTCCCTGCATGATTATGACGATCAAGAACCCAAAAATGGCTTCGTTTGTGGAGAAAGTAGTAGAAGAGTATATGTGCTTGAGAGACTGTATGTGGAAGAAAATGAAAATGGGTCGGTCAAGTTCATCTTGTGGTTTGCAAGTGCCTTGGGAGGAATTGAG 2880 0.4472 MSTGEGKFGRCKWPNPLSLSLSVENLKEDVIVSSPKGTFTAGFYPVGDNAYCFAIWYTQQPQTLVWMANRDQPVNGKRSKLSLLDIGNLVLTDADQFQVWSTNTVTSSDKVQLSLYDTGNLVLLDNSNHSSPLVLWQSFDFPTDTLLPNQPLSENTNLISSRSGTNYSSGFYKLFFDSENVLRLMYQGPRVSSVYWPYAWLQNNNFGNGNGRSTYNDSRVVVLDDFGKLVSSDNFTFTTTDYGIMLQPRLTLDHDGNVRLYSIQDGQHKWSVSGIFRLQPCFIHGICGPNSYCSHIPTTARKCSCLPGYRWIDSEDWSQGCEPNFQLWCNNNNKTEQEFSFLRLPEVDFYGYDYGLLQNQTYQQCADRCLELCQCKGFQHSFSGGNGDSGQCYLKTQLLNGHHSPGFSGAFMLRVPLSQDYDESERAIGLVCGGSSNGKENFLERPYVEEKENGSLKFMLWFAIGLGVIQLVCIFLVWCFLLRENRTLDPIDDKHGYVLAAATGFRKFSYSELKQASKGFSEEIGRGGGGTVYKGVLSDDRVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKYRLLVYEYMENGSLAENLSSTSNVLDWSKRYNIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVADFGLSKLLNRSSNVDNSSFSRIRGTRGYMAPEWVFNLAITSKVDVYSYGIVVLEMITGRSPTTGVQITEIEAKSPHHERLVTWVREKRKKGSEMGSFWVDQIVDPTLGLNYDMNKMEILATVALECVEEEKDVRPTMSQVAERLLSAFSLSVEKLIEEVIVSSPNFQLWCNKTRARVSLIFTVMTIASSKITRTNNVHVNLCLKLCECKGFVHGYSGQGGSGECYLKTQLLNGHRTPGFSKSFILRLPLSLHDYDDQEPKNGFVCGESSRRVYVLERLYVEENENGSVKFILWFASALGGIE 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00110 960 Gene3D Hepatocyte Growth Factor 343 412 - -
Pste7g00110 960 CDD STKc_IRAK 524 802 - -
Pste7g00110 960 CDD B_lectin 33 142 IPR001480 -
Pste7g00110 960 Gene3D Phosphorylase Kinase; domain 1 491 593 - -
Pste7g00110 960 Gene3D - 21 141 IPR036426 -
Pste7g00110 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pste7g00110 960 Pfam Protein kinase domain 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00110 960 ProSiteProfiles PAN/Apple domain profile. 329 428 IPR003609 -
Pste7g00110 960 FunFam Serine/threonine-protein kinase 594 809 - -
Pste7g00110 960 PANTHER OS07G0415500 PROTEIN 18 810 - -
Pste7g00110 960 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Pste7g00110 960 Pfam S-locus glycoprotein domain 232 310 IPR000858 GO:0048544
Pste7g00110 960 ProSiteProfiles Bulb-type lectin domain profile. 17 136 IPR001480 -
Pste7g00110 960 SUPERFAMILY Protein kinase-like (PK-like) 502 802 IPR011009 -
Pste7g00110 960 ProSiteProfiles Protein kinase domain profile. 518 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00110 960 SMART ntp_6 336 415 IPR003609 -
Pste7g00110 960 SMART ntp_6 834 905 IPR003609 -
Pste7g00110 960 FunFam S-receptor-like serine/threonine-protein kinase 488 593 - -
Pste7g00110 960 Gene3D Transferase(Phosphotransferase) domain 1 594 816 - -
Pste7g00110 960 SMART serkin_6 518 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00110 960 CDD PAN_AP_plant 334 416 - -
Pste7g00110 960 SMART blect_4 22 142 IPR001480 -
Pste7g00110 960 Pfam D-mannose binding lectin 63 157 IPR001480 -
Pste7g00110 960 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 160 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00110 Pste-Chr7 924599 933768 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00110 508 802 Trihelix Transcription Factor Family AT5G38560 43.813 4.02e-68 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste7g00110 Pkinase 1.5e-53 CL0016