Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00108 TTTTAGATTCGGTATGATATTGAATTTCTCTACTTTTATAAAGGCTATTTTTTGATCGTTTTAAATGGGTACAGAGTGAGGATTAAGTAGAGAACAGCATTAGAAATTGCGAATGGCAACTTCAACAGTGTTACTAGCTCTTCTCCTTTATCTAAGTTTCCATGGTGTTGGTCACTCTTCTTCATTCTCACTCTCAGTGGAGAAGCTCAACGAAGACGTTATAGTGTCATCACCGAAACGCACGTTCACCGCAGGCTTTCACCCGGTTGGGGATAACGCTTACTGCTTCGCAATATGGTACACCCAACCACCTCGCACCGTTGTTTGGATGGCCAACCGGGACGAGCCGGTTAACGGAAAACGCTCCACCCTCTCACTTCTCAAAACCGGTAACCTCGTACTCACCGACGCGGGTCAGTTCCCAGTGTGGTCCACCAACACCAACACCAACACCAACACCAACACCGCCACCTCGTCCCAACAAGTTGAGTTACATTTGTACGACACCGGCAACCTCGTTCTCCTCGACAACCAGAACAGTTCCTCACCCCTTTTTCTGTGGCAAAGCTTCGATTTTCCAACGGACACGCTCCTTCCTAACCAGCCTCTGAGGAAGACCACCAACCTTGTTTCCTCGAGAAGCGGCACGAACCATTCCTCTGGTTTCTACAAGCTCTTCTTCGACTTCGAGAATGTTCTGCGGCTCATGTACCAAGGCCCTCATGTTTCCACCGTTTATTGGCCATATGTATGGCTTCAAAACAACAACTTCGGTAATGGTAACGGTAGATCCACTTTCAACGATAGCAGGGTTGTTGTGCTCGATGATTTTGGCAGTGTGGTTTCTTCTGATAACTTCACTTTCAACACAAGTGATTACGGGATCATGCTTCAACGGAGATTGACCCTCGATCATGACGGTAATGTCAGGCTCTATAGCATCCAAGACGGACAACACAAGTGGGTGGTGTCCGGCCAATTTCGACTACAACCTTGTTTTATTCATGGGATTTGTGGACCCAATAGTTATTGCAGTAATCACCCTAATTTTGGAAGAAATTGTGCCTGCCTTCCAGGATATAGATGGGTTGATAGTCAAGACTGGTCCCAGGGTTGTGTATCGAAATTCCAGCTTTGGTGCAACGCTACCACGCAAGAGTCTCGCTTCCTGCACTTACATGAATACGATTTTTACGGATATGACTATCGCTATTATCCAAATCACACATTCGAACAATGTGTTCAGCTGTGCTTGGGGTTGTGCGAATGCAAAGGGTTTCAACACAGCTTTTCTGACCAAAGTATTTCTAGTAGTCAGTGCTACCTGAAGACGCGGTTGCTAAATGGGCATCATTCACCAGGTTTTAATGGAACATTCATCCTACGACTGCCTTTGACCTTCCATGATGAGAGCCCCACCCAAAATGATTTGGTTTGTGGGGGAACTAGTGGAGGATCAAAAGTACTTGAGAGACAGTATGTTGAAGAAAAAGAAAATGGATCAGTGAAGTTCATGCTGTGGTTTGCAAGTGCCTTGGGAGGAATTGAGCTCGTGTGCATCTTTATGGTGTGGTGTTTCTTGTTTAGGAATAATGCTGATAAGCAACATTATGTTCTTGCAGCAGAAGCAGGGTTTAGGAAATTCAGTTATTCAGAACTGAAACAGGCCACCAAAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGTACTGTCTATAAGGGTGTCTTGTCTGATAATCGAGTTGTGGCGATAAAGCAACTGCATGAAGTAGAGAACCAAGGGGAAAGTGAGTTCCTGGCTGAAGTAAGCATAATTGGAAGGCTTAACCACATGTACTTAATTGGCATGCTAGGGTATTGTGCAGAGGGAAAGTATAGGTTATTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAATCTTTCATCGGGTTCAAAAGTACTTGACTGGAGTAAGAGGTATAACATTGCCAAGGGAACAGCAAGGGGTCTGGCCTATTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCCCAAAATATACTTCTTGACTCTGATTATCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGCTATTTAACCGGAACAGCCTCGACAATTCAACCTTCTCGAGGATAAGAGGAACAAGAGGCTACATGGCACCGGAGTGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTCTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCAACAACAGTTATCCAAATTACAGAAGTAGAAGCGGAATCACATCATCAAGAGCGGTTGGTGACATGGGTGAGGGAGAAAAGGAGGAAAGGATCAGAAGTGGGATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTAGGATCAAACTATGACAGGAGTGAAATGGAGATATTGGCAACCGTGGCTTTGGAATGTGTGGAGGAAGAGAAAGACGTGAGACCCAGCATGAGTCATGTTGTTGAGAGACTCCAAAATCATGAACACAATTATTTGACTAAAGAATAG 2560 0.448 MATSTVLLALLLYLSFHGVGHSSSFSLSVEKLNEDVIVSSPKRTFTAGFHPVGDNAYCFAIWYTQPPRTVVWMANRDEPVNGKRSTLSLLKTGNLVLTDAGQFPVWSTNTNTNTNTNTATSSQQVELHLYDTGNLVLLDNQNSSSPLFLWQSFDFPTDTLLPNQPLRKTTNLVSSRSGTNHSSGFYKLFFDFENVLRLMYQGPHVSTVYWPYVWLQNNNFGNGNGRSTFNDSRVVVLDDFGSVVSSDNFTFNTSDYGIMLQRRLTLDHDGNVRLYSIQDGQHKWVVSGQFRLQPCFIHGICGPNSYCSNHPNFGRNCACLPGYRWVDSQDWSQGCVSKFQLWCNATTQESRFLHLHEYDFYGYDYRYYPNHTFEQCVQLCLGLCECKGFQHSFSDQSISSSQCYLKTRLLNGHHSPGFNGTFILRLPLTFHDESPTQNDLVCGGTSGGSKVLERQYVEEKENGSVKFMLWFASALGGIELVCIFMVWCFLFRNNADKQHYVLAAEAGFRKFSYSELKQATKGFSEEIGRGAGGTVYKGVLSDNRVVAIKQLHEVENQGESEFLAEVSIIGRLNHMYLIGMLGYCAEGKYRLLVYEYMENGSLAQNLSSGSKVLDWSKRYNIAKGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLFNRNSLDNSTFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTVIQITEVEAESHHQERLVTWVREKRRKGSEVGSSWVDQIVDPALGSNYDRSEMEILATVALECVEEEKDVRPSMSHVVERLQNHEHNYLTKE 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00108 815 PANTHER OS07G0415500 PROTEIN 6 805 - -
Pste7g00108 815 SUPERFAMILY Protein kinase-like (PK-like) 502 805 IPR011009 -
Pste7g00108 815 SMART blect_4 29 156 IPR001480 -
Pste7g00108 815 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Pste7g00108 815 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Pste7g00108 815 ProSiteProfiles Bulb-type lectin domain profile. 23 150 IPR001480 -
Pste7g00108 815 Pfam D-mannose binding lectin 69 169 IPR001480 -
Pste7g00108 815 Coils Coil 804 815 - -
Pste7g00108 815 Gene3D Transferase(Phosphotransferase) domain 1 597 814 - -
Pste7g00108 815 PIRSF SRK 1 814 IPR024171 GO:0004674
Pste7g00108 815 FunFam S-receptor-like serine/threonine-protein kinase 491 596 - -
Pste7g00108 815 Gene3D Phosphorylase Kinase; domain 1 488 596 - -
Pste7g00108 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pste7g00108 815 Pfam Protein kinase domain 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00108 815 CDD B_lectin 39 156 IPR001480 -
Pste7g00108 815 SMART serkin_6 521 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00108 815 Pfam S-locus glycoprotein domain 245 324 IPR000858 GO:0048544
Pste7g00108 815 Gene3D - 27 154 IPR036426 -
Pste7g00108 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 171 IPR036426 -
Pste7g00108 815 FunFam Serine/threonine-protein kinase 597 811 - -
Pste7g00108 815 ProSiteProfiles Protein kinase domain profile. 521 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00108 815 CDD STKc_IRAK 527 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00108 Pste-Chr7 907428 910446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00108 511 808 Trihelix Transcription Factor Family AT5G38560 45.183 2.93e-73 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste7g00108 Pkinase 4.7e-54 CL0016