Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00106 ATGGTCTCGTCGACGCTGTTTTTGGTTTTTCTTTGGCTAATTTCCGAGTGCTTTCAGCACTCATGTTCCTTCTCCTTCTCCCTCTCTGTAGAGAATCACAAAGAAGACGTAATAGTTTCATCACCAAAAGGAACATTCACCGCAGGGTTTTATCCCGTAGGACAAAACGCATACTGCTTTGCAATATGGTACACCCAATCACCTCAAACCCTCGTGTGGATGGCCAACCGGGACCAGCCGGTTAACGGAAAAAGCTCCACGCTTTCCCTCCTCAAAACCGGTAACCTCGTATTAACAGACGCGGGTCAGTTCCCAGTGTGGTCCACCAACACCAACACCAACACCAACACCGCCACCTCATCCCAACAAGTTGAGTTACATTTGTACGACACCGGCAACCTCGTTCTCCTCGACAACCAGAACAGTTCCTCACCCCTTTTTCTGTGGCAAAGCTTCGATTTTCCAACGAACACTCTTGTTCCGGGTCAAATTCTCCGGAAGAGCGCCAACCTTGTTTCCTCGAGAAGCTCGACCAACCATTCCTCTGGTTTCTACAAGCTCTTCTTCGACTTCGAGAACGTGCTTCGTCTCATGTACCAAGGTCCTCGCGTTTCAAGCGTTTACTGGCCAGATCCTTGGCTTCAGAACAATAATTTTGGTAATGGTGGCACGGGTAATGGTAGATCCACCTACAACGATAGCAGGTTCGCTGTACTGGATGAGCTGGGTTATTTCGTTTCTTCCGATAACTTCAATTTCAGAACAAGTGATTACGGGACCGTGCTCCAACGAAGGTTGACCCTGGATCCTGACGGTAGTGTGAGGCTTTACAGCAGCAACGATGGAGAAGAAAATTGGAGAATGTCAGGGGAGTTTCATCGGGCAAATCCATGTTACGTTCATGGGATCTGTGGACCTAATAGTTACTGCAACTTCAAACCTACAAGTGGCAGAAAGTGTTCATGCCTTCCAGGTCATACCTGGGTTGATAGTGAAGACTGGTCTCAAGGTTGCAAGCCAAATTTGGAACATTCATGTAGCAACGACAGCCAGTATGAATCTCGCTATGTGCGCATACCCGATGTCGATTTCTATGGATACGACTATGACTACTTTGGAAATTACAGCTATAAACAATGTGAGGATCTGTGCTCACAGTTGTGCCAATGCAAGGGCTTTCAACACAGCTTTTCAATGGAAAATGCTTTCTTTCAGTGCTACCCAAAGACTCGTTTGCTAAATGGGAATAGTCAACCGGGATTCACTGGATTATTCTTCCTGCGACTGCCTTTGGAATCCCATGATGAGTATCAGAACCCCATCGAAAATAATAATAATAACAATGGCTTGGTTTGTGGGGAACATAGTGGAGTAAGGATGTTGGAGAGATCATACGTCCAAGGTGGAGAAAATGGTTCGGTGAAAATCGTGTTATGGTTTGCCAGCATCTTGGGAGGAATTGAGGTTATGTGCATCTTTCTAGTGTGGTGTTTTTTGTTTTGGAATAATAAGATTAAGGCGTTAGTGTTACCATCGGATATTGATAGACAAGGGTATGTTCTTGCAGCAGCATCGGGGTTTCGGAAATTCAGTTATTCTGAACTGAAACACGCCACCAAAGGCTTCAGTGAAGAGATAGGAAGGGGTGGTGGGGGTACTGTGTATAAGGGTGTCTTGTCTGATGATCGAGTTGTGGCCTTAAAGCGACTGCATGAAGTAGCGAACCAAGGAGAGAATGAGTTCTTGGCTGAGATAAGCATCATTGGAAGGCTTAACCACATGAACCTAATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAGAATGGTTCTTTAGCTCAGAACCTTGCATCAAGTTCAAATGTACTTAATTGGAGTAAGAGGTATAACATTGCTTTGGGAACGGCAAGGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGGTTTTGCATTGTGACATTAAGCCCCAAAATATACTTCTTGACTCTAATTACCAACCAAAGGTAGCAGATTTTGGCTTGTCTAAGCTACTTAACCGAAACAACCTCAATAACTCAAGCTTCTCGAGGATAAGAGGAACAAGAGGCTACATGGCGCCGGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCTATAACTGGTATCCAAATCACGGAAGTAGAAGCAGAGTCACCTCATCACGAGAGGTTGGTGACATGGGTGAGGGAGAAAAAGACCAAAGGATCACTAGTGGGATCATCTTGGGTGGATCAAATCGTTGATCCTTCTTTGGGATCAAACTATGACATCAATGAATTGGAGATATTGGCAACAGTGGCTTTGGAATGTGTTGAGGATGAGAAATATGCAAGGCCAAGCATGAGTCAAGTTGCTGAGAAGCTGCAAAGTCATGCACACGATTCTTGA 2493 0.4521 MVSSTLFLVFLWLISECFQHSCSFSFSLSVENHKEDVIVSSPKGTFTAGFYPVGQNAYCFAIWYTQSPQTLVWMANRDQPVNGKSSTLSLLKTGNLVLTDAGQFPVWSTNTNTNTNTATSSQQVELHLYDTGNLVLLDNQNSSSPLFLWQSFDFPTNTLVPGQILRKSANLVSSRSSTNHSSGFYKLFFDFENVLRLMYQGPRVSSVYWPDPWLQNNNFGNGGTGNGRSTYNDSRFAVLDELGYFVSSDNFNFRTSDYGTVLQRRLTLDPDGSVRLYSSNDGEENWRMSGEFHRANPCYVHGICGPNSYCNFKPTSGRKCSCLPGHTWVDSEDWSQGCKPNLEHSCSNDSQYESRYVRIPDVDFYGYDYDYFGNYSYKQCEDLCSQLCQCKGFQHSFSMENAFFQCYPKTRLLNGNSQPGFTGLFFLRLPLESHDEYQNPIENNNNNNGLVCGEHSGVRMLERSYVQGGENGSVKIVLWFASILGGIEVMCIFLVWCFLFWNNKIKALVLPSDIDRQGYVLAAASGFRKFSYSELKHATKGFSEEIGRGGGGTVYKGVLSDDRVVALKRLHEVANQGENEFLAEISIIGRLNHMNLIGMLGYCAEGKHRLLVYEYMENGSLAQNLASSSNVLNWSKRYNIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSNYQPKVADFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPITGIQITEVEAESPHHERLVTWVREKKTKGSLVGSSWVDQIVDPSLGSNYDINELEILATVALECVEDEKYARPSMSQVAEKLQSHAHDS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00106 830 SMART serkin_6 540 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00106 830 PANTHER OS07G0415500 PROTEIN 3 825 - -
Pste7g00106 830 Pfam S-locus glycoprotein domain 260 326 IPR000858 GO:0048544
Pste7g00106 830 CDD B_lectin 40 155 IPR001480 -
Pste7g00106 830 Pfam Protein kinase domain 543 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00106 830 Gene3D - 30 153 IPR036426 -
Pste7g00106 830 FunFam Serine/threonine-protein kinase 616 830 - -
Pste7g00106 830 Gene3D Transferase(Phosphotransferase) domain 1 616 830 - -
Pste7g00106 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 173 IPR036426 -
Pste7g00106 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Pste7g00106 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Pste7g00106 830 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524
Pste7g00106 830 Pfam D-mannose binding lectin 70 169 IPR001480 -
Pste7g00106 830 ProSiteProfiles Protein kinase domain profile. 540 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00106 830 FunFam S-receptor-like serine/threonine-protein kinase 511 615 - -
Pste7g00106 830 Gene3D Phosphorylase Kinase; domain 1 513 615 - -
Pste7g00106 830 SMART blect_4 29 155 IPR001480 -
Pste7g00106 830 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Pste7g00106 830 SUPERFAMILY Protein kinase-like (PK-like) 523 823 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00106 Pste-Chr7 889920 894179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00106 530 825 Trihelix Transcription Factor Family AT5G38560 44.482 6.79e-74 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste7g00106 Pkinase 2.9e-53 CL0016