Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00096 CTTGAAACAACAAGATTTGCGGTTTTGCCTGCAAATTTTTTTCCCCTCATTCTATATTGCTCAGGTGGTGTTCCTGTTACTCCAAAGCACCCCTGAGATTCATTCGCAAATTTAAAAAAAAAAAATTCAATTCTGTTTTTTTTTTTTCTGATTTTCTTTTCGTTTTCGATTCCGATTTCGGTTTTGATCTTCCAATGGCGTCCGATGGCTTCACCGACAAGAACACTTTGTTCAGAAAGCTCAAAGCGAAATCCGAAAATAAGATGTGTTTCGATTGCAATGCGAAGAACCCTACCTGGGCGTCCGTCACGTACGGGATCTTCCTCTGCATCGATTGCTCCGCCGTTCATCGCAACTCATGGAGTCCTGAGCAACTAAAAATGATGAGCTTTGGAGGAAACAATCGTGCACAAGTTTTCTTCAAGCAACATGGTTGGACCGATGGTGGTAAAATAGAAGCTAAATACACATCCAGAGCTGCAGACTTGTATAGGCAAATTCTATCAAAGGAAGTAGCTAAAAGTATGGCTGAGGATGTTGCTTTGCCTTCATCACCTGTTGCTTCTCAGTCTGCCCAGGGAGTTAATGGGCTTCCTGAAGTCAAGACCAATGAAGTGCCCAAAGAAAACACTTTGGAAAAGGCAGAAAAGCCTGAAACCACTTCTTCACCTAAAGCTTCACATCCAGTAACTGTCAAGAAACCTATTGGTGGTAAAAAAGCTGGGAAGACTGGGGGACTTGGTGCTCGTAAACTCACTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGCAGCCTGAGGAACCCCCTGTTGCTCCCGTTTCATCCTCAACAAACAATATGCCTGCTGGGCCATCTCTAACATCCCGGTTCGAGTATGTGGAAAATGTCCAATCATCTGAGTTGAATACTGGAGGCTCAAATGTGCTTAGTCATGTGTCCCCACCAAAGTCATCATCAAGCTTCTTTGCAGACTTCGGTATGGATGGTGGCTTTCCAAAGAAAAGTGGGCCGAGCTCGTCCAAAGTGCAAATTCAGGAATCGGATGAAGCAAGAAGGAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATTTTTCGGAGATCAAAACAAATCTGCAGATGTGGATTCTCAAGTTACTTTGTCCAAGTTTTCGGGTTCCAGTGCCATATCCAGTGCCGATCTTTTTGGTGACTCAAAAGACAGTGCCATTGACCTCAGTGCTAGCGATCTTATTAATCGATTATCTTTCCAGGCACAACAGGATCTCTCTTCCCTTAAGAACATTGCAGGAGAGACTGGCAAGAAGCTCAGTTCATTGGCCTCCACATTGATGACAGATCTTCAGGACCGAATCCTCTAAACTGTATGCTCTGTATTTAAGAGAATCTTTGGAGTTTGTTACATATGCCAGCCAATTATGGTGTTTCAAATGTAATAGAAGAGTTCAAATATACAATTCTTTTTGGAAAATAAGATACTATATTTTCAGGCTTGTCATATAGACTGGTGGTTCTATTTTGTATAACAGAGGTACTGCTTAGAGGTTGATAATGTTTTAGGTTTGGTTTCTTTTGGGTGTAGTCGATACCAGTTTGTCGTAAACTCTGGCTGTGTTTCTGTCATCTTCAGTCGGTGAAATAGTTCTCTTATTTACATATATAAATTGGCTATCTTATCTGATGGTTAGATTTTGAAGGAAAATTCTTATAAAAAAAATGGAG 1722 0.4123 MASDGFTDKNTLFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRNSWSPEQLKMMSFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKEVAKSMAEDVALPSSPVASQSAQGVNGLPEVKTNEVPKENTLEKAEKPETTSSPKASHPVTVKKPIGGKKAGKTGGLGARKLTKKPSESLYEQQPEEPPVAPVSSSTNNMPAGPSLTSRFEYVENVQSSELNTGGSNVLSHVSPPKSSSSFFADFGMDGGFPKKSGPSSSKVQIQESDEARRKFSNAKSISSSQFFGDQNKSADVDSQVTLSKFSGSSAISSADLFGDSKDSAIDLSASDLINRLSFQAQQDLSSLKNIAGETGKKLSSLASTLMTDLQDRIL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00096 388 Pfam Putative GTPase activating protein for Arf 12 86 IPR001164 GO:0005096
Pste7g00096 388 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Pste7g00096 388 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Pste7g00096 388 SUPERFAMILY ArfGap/RecO-like zinc finger 11 111 IPR037278 -
Pste7g00096 388 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 6 388 - -
Pste7g00096 388 MobiDBLite consensus disorder prediction 119 221 - -
Pste7g00096 388 Gene3D Arf GTPase activating protein 2 124 IPR038508 -
Pste7g00096 388 MobiDBLite consensus disorder prediction 291 307 - -
Pste7g00096 388 SMART arf_gap_3 10 112 IPR001164 GO:0005096
Pste7g00096 388 MobiDBLite consensus disorder prediction 204 221 - -
Pste7g00096 388 MobiDBLite consensus disorder prediction 119 133 - -
Pste7g00096 388 MobiDBLite consensus disorder prediction 265 307 - -
Pste7g00096 388 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 114 IPR001164 GO:0005096
Pste7g00096 388 MobiDBLite consensus disorder prediction 141 156 - -
Pste7g00096 388 CDD ArfGap_ArfGap2_3_like 8 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00096 Pste-Chr7 823860 831476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00096 13 77 C2H2 Transcription Factor Family AT4G21160 33.750 2.80e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00096 7 823860 831476 Pste7g00096 7 823860 831476 ECH
Pste1g01019 1 3249950 3257843 Pste7g00096 7 823860 831476 PCT