Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00088 AAGATTAAGGAAAAAGCTAGCTAGGATGCTGGAACTGAAGCTACTGGCCTTCTTAACGTTGATATGGTGCTGCACTAATGATATTATTGTAGATGGAAATCTACTAATAAACGAGGGGTGCAGCGCATACAACGTAACCAACATGCCTAGCTTCTTAGCCAATCTCAATGAAATGTTTCAAAGCCTGAGAGCAAAAATTAGCAATCAGAAGAAGCACTTCGCCATAGAAGAAAAACCCGGGAGACGTGCTCACATATGCTATATTTCAATGCAGAAACTATCTCTCCCAAAATATGAGAGCGACAGGTTCTATGAGCAGACAACTTTACCTGGAAATGGTGTATCATGTGGGAACACGAGTACAAGTGTCACTGATTTTAGAGTAGTTGTACAACATGTTTTAAGGGAGCTCCAAACAGCAACACCAAAAGTTAAAGGATTTTATGCAGCTACTAAGACACAGGTGGCTGGTGGTGCAATTTATGCGGTTGCACAGTGTGTTGAAACTGCCATAGAGCCTAAATGTCTGGATTGCTTGCATGTTGGATACAAAAACTTACAAACTTGTCTTCCCAACACAGAGGGTAAAGCATATGATGCTGGTTGTTTTATGAGATACTCCACCACACCATTCTTTGCTGATAATCATACCATTAATCTTTCATCCTATTTTAAACAAGGAGGTTCTAACAAAAAGTGGACTATTATAGGTGGTGTTGTTGGAGGTGCGGCTGTACTCCTTGTATTGTTTCTCTTGAAATTGACTACAATATCAAAGAGGAATGACAGGGTGACTTATTGGGAGCAACTGAATTGCGAGGTCCAGTTAATTACAATTGCAACAAAAAATTTCAACGCTGAAAATAAACTAGGAGCAGGTGGTTTTGGTGATGTTTACAAGGGTATTTTGAAAAATGGAAAAGTTGTTGCCGTTAAGAAACTAGTGTTGGGAAAGTCTAATCGGGTGAAGGATGATTTTGAAAGTGAAGTCAAGCTTATAAGTAATGTTCATCATAAAAATCTCATTAGACTTCTTGGTTGCTGCATCAAAGACCGAGAGAGATTCTTAGTTTATGAATACATGGCAAATAGCAGTCTTGACAAATTCTTATTTGGCAATAAAAAAGGTATCCTCAATTGGGAGCAACGATATAATATAATTTTAGGCACAAGGGGATTAGCATATCTACATGAGGAATTCCATGTGTCCATCATACATAGAGATATCAAAACTGCTAATATCCTCTTAGATGATAATCTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTACCAGGGGATCGTTCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACTGCACCTGAGTATGCAATGAATGGACAATTATCAGAGAAGGCTGATATCTATAGCTTTGGTATTGTGGTACTAGAAATCATAAGTGGTCAAAAGAGTACTAATGTTAAGAGTAGTGAAGATGAACCTGAATACCTTCTTCAAAGAGCATGGAAACTATATGAGAGAGACCTTCACTTGGAGCTATTGGAAGAGACCATAAACCACAATGAATATAATGTAGAAGAAGTGAAAAAAATCATAAAAATTGATTTATTATGCACTCAAGCATTAGCTATAATGAGGCCAACAATGTCTGAAATTGTACTATTACTCAAAAGCAAGAACACAGTTGAGAACCTACAACCAACAATGCCTGTGGTTGTTGGAACAAGTACAATTCCTCAAGAAGGAAACTCTATACATGTGGTTGTAGGAACGAATATGATGACTCAAGAAGACAACTTTACTAGTTTGTCTAATGCTCCTGCCTCCATTTCTATTCCATCAGCCCGA 1846 0.3792 MLELKLLAFLTLIWCCTNDIIVDGNLLINEGCSAYNVTNMPSFLANLNEMFQSLRAKISNQKKHFAIEEKPGRRAHICYISMQKLSLPKYESDRFYEQTTLPGNGVSCGNTSTSVTDFRVVVQHVLRELQTATPKVKGFYAATKTQVAGGAIYAVAQCVETAIEPKCLDCLHVGYKNLQTCLPNTEGKAYDAGCFMRYSTTPFFADNHTINLSSYFKQGGSNKKWTIIGGVVGGAAVLLVLFLLKLTTISKRNDRVTYWEQLNCEVQLITIATKNFNAENKLGAGGFGDVYKGILKNGKVVAVKKLVLGKSNRVKDDFESEVKLISNVHHKNLIRLLGCCIKDRERFLVYEYMANSSLDKFLFGNKKGILNWEQRYNIILGTRGLAYLHEEFHVSIIHRDIKTANILLDDNLQPKIADFGLARLLPGDRSHLSTKFAGTLGYTAPEYAMNGQLSEKADIYSFGIVVLEIISGQKSTNVKSSEDEPEYLLQRAWKLYERDLHLELLEETINHNEYNVEEVKKIIKIDLLCTQALAIMRPTMSEIVLLLKSKNTVENLQPTMPVVVGTSTIPQEGNSIHVVVGTNMMTQEDNFTSLSNAPASISIPSAR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00088 607 FunFam Cysteine-rich receptor-like protein kinase 2 353 555 - -
Pste7g00088 607 Pfam Protein kinase domain 277 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00088 607 SMART serkin_6 276 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00088 607 FunFam Cysteine-rich receptor-like protein kinase 2 103 203 - -
Pste7g00088 607 Coils Coil 44 64 - -
Pste7g00088 607 Gene3D Transferase(Phosphotransferase) domain 1 353 561 - -
Pste7g00088 607 ProSiteProfiles Gnk2-homologous domain profile. 100 203 IPR002902 -
Pste7g00088 607 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 64 566 - -
Pste7g00088 607 CDD STKc_IRAK 282 548 - -
Pste7g00088 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Pste7g00088 607 Gene3D Phosphorylase Kinase; domain 1 243 352 - -
Pste7g00088 607 Pfam Salt stress response/antifungal 111 200 IPR002902 -
Pste7g00088 607 ProSitePatterns Protein kinases ATP-binding region signature. 282 305 IPR017441 GO:0005524
Pste7g00088 607 ProSiteProfiles Protein kinase domain profile. 276 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00088 607 Gene3D - 104 203 IPR038408 -
Pste7g00088 607 FunFam Cysteine-rich receptor-like protein kinase 2 246 352 - -
Pste7g00088 607 SUPERFAMILY Protein kinase-like (PK-like) 266 565 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00088 Pste-Chr7 743687 754206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00088 89 563 Receptor kinase-like Gene Family AT1G70520 37.398 8.01e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste7g00088 Pkinase 1.3e-47 CL0016