Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00086 ATGGACTGTGGTGGACACAACATCATGTTCAGCCTAAACAACCACACCAAAGAGGAAACCAATAACAACAATACTCTTTGGTACTCTTCCTGGCAACCTACGACTAACGTTATTACCACTTCTTGTAATACTAGTACACTGCAGATGGGGGAGGGATACGGCCTCGCCGCTCACGTGCAGGCCGACAACCACCTCACGTGCTTGCACCTCGGCAAGAGGCATTACTTCGAGGATGCCACGGGCAACCGACACGTGTGCGGTGGAGCTAATGATAAGAGAGGAAGGGGCTGTCATGGCAAAACGGCGCCGTTTGCGGTGGTGCCTCGGTGTCAGGTCGAGGGGTGCCACGTGGCCCTCTTCAACGCCAAGGAGTACCACAGGAGGCACAGAGTTTGTGATATGCATTCCAAGGCACCCAAAGTTGTGGTCTTAGGCTTGGACCAGAGATTCTGTCAGCAGTGTAGCAGGTTTCATGTGGTGTCGGAGTTCGACGACTCAAAGAGGAGTTGTAGGAGGAGACTCGCTGGCCACAATGAGCGAAGAAGAAAGAGCTCTCACCTATCTGTTACTAGGAACTCTAAACAAGGGTGTGCTCTCTCTCTTCTGTCATCTGGGAGTAGTGATCATAATTGGCTTTCTCATGCTGATCTCTCCACAAGATGCAGTGCAGCATTGCGTGAATTGATAGCAGAAAATCGTGCAGCCCTCATGAGTAGACAACTTGTTTCTGACAGAGACTGGCATGTTGCTATGCCCCACCATGCTGCAGTGGAACAAGACTTTGAGCAGTTACAACCTGAGTCCAATTATTTCCCACAACAGATGTTTCCCCAGACACAATAATAATAATAATGCTTCTGTTGATCTGAACTTGGTGCTGTGAAGACCCCAAATCTAATGAATGCACTTTCCAGACTGTATTATTGT 927 0.4908 MDCGGHNIMFSLNNHTKEETNNNNTLWYSSWQPTTNVITTSCNTSTLQMGEGYGLAAHVQADNHLTCLHLGKRHYFEDATGNRHVCGGANDKRGRGCHGKTAPFAVVPRCQVEGCHVALFNAKEYHRRHRVCDMHSKAPKVVVLGLDQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHLSVTRNSKQGCALSLLSSGSSDHNWLSHADLSTRCSAALRELIAENRAALMSRQLVSDRDWHVAMPHHAAVEQDFEQLQPESNYFPQQMFPQTQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00086 280 FunFam Squamosa promoter-binding-like protein 14 102 171 - -
Pste7g00086 280 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 63 231 IPR044817 GO:0003677
Pste7g00086 280 SUPERFAMILY SBT domain 108 186 IPR036893 GO:0003677|GO:0005634
Pste7g00086 280 Gene3D - 105 171 IPR036893 GO:0003677|GO:0005634
Pste7g00086 280 Pfam SBP domain 110 183 IPR004333 GO:0003677
Pste7g00086 280 ProSiteProfiles Zinc finger SBP-type profile. 107 184 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00086 Pste-Chr7 728030 730607 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00086 68 221 SBP-box Gene Family AT2G42200 47.590 1.92e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pste7g00086 SBP 7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00086 7 728030 730607 Pste7g00086 7 728030 730607 ECH