Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00068 ATGTCTTTGTTCGAGTACGACATGCCGCCGACCGCTGCACCATACAACACCCCACCGGCGCTGATAGCGTTCACGCTTGGCGTCCTTGTCGTGTGCTTCGTTGCATTCAGCATTGTCTATTTATGCAAATATTGCTTCTCCAGCGTGATCCACACATGGGCATTTCAACGCACCGCATCGGGTTCCCTCATTCGTTTGACACCTCACAGGTCACCCCCTCGAGGCCTTGATCCTTCAATGCTTCAACTGTTCCCCACATTTACGTACTCCTCCGTTAAAGACCTAAGAAAGGATCAAAAGTACGGTCTTGAATGTGCAATTTGTTTGTTGGAGTTTGAGGATGATAACATGCTTCGCCTCTTGACGCTCTGCTGCCATGTTTTTCACCAGGAGTGTATTGATCTCTGGCTGCGTTCACACAAAACTTGCCCCGTTTGCCGGAGGAACCTTGATTCGCCACCGGAGGAAGTACAAAAGACAGGTGATGTTAATGACACCACAATGGTGACATCAACAAATGGAGAGATACACATTAATGTAGGAGAGGAAGAACAAGATGGTGGTGAAGTTGAAGTTTGTAAACACCTTCACAAGGCTGGCTCAATGGTAGAGCAAACGTTTGCTCGGTCGCACTCAACCGGGCACTCTATAGTTTTGATTAGAGGTGAAGGAGATGAGGGGAAGAGTAGTGATGATGATAAATACACATTGAGATTACCGGAGCATGTTTTGAGAGTGAGACAAAATAAACATAATTGTACTAGAAGTTGTGTGAGTTACAAGGACATGACAAGGTTTGTTACCAGTGAACCTTGTAGTAATTGTGGCTTTGTTCAACCTATGCCAACTGGGAGTTCTTCCCCTAGCCATGATAAAAAATCTTGA 885 0.4576 MSLFEYDMPPTAAPYNTPPALIAFTLGVLVVCFVAFSIVYLCKYCFSSVIHTWAFQRTASGSLIRLTPHRSPPRGLDPSMLQLFPTFTYSSVKDLRKDQKYGLECAICLLEFEDDNMLRLLTLCCHVFHQECIDLWLRSHKTCPVCRRNLDSPPEEVQKTGDVNDTTMVTSTNGEIHINVGEEEQDGGEVEVCKHLHKAGSMVEQTFARSHSTGHSIVLIRGEGDEGKSSDDDKYTLRLPEHVLRVRQNKHNCTRSCVSYKDMTRFVTSEPCSNCGFVQPMPTGSSSPSHDKKS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00068 294 CDD RING-H2_EL5-like 104 147 - -
Pste7g00068 294 PANTHER RING FINGER DOMAIN-CONTAINING 16 155 - -
Pste7g00068 294 Pfam Ring finger domain 104 147 IPR001841 -
Pste7g00068 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 153 IPR013083 -
Pste7g00068 294 SMART ring_2 105 146 IPR001841 -
Pste7g00068 294 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Pste7g00068 294 SUPERFAMILY RING/U-box 96 153 - -
Pste7g00068 294 FunFam E3 ubiquitin-protein ligase ATL6 65 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00068 Pste-Chr7 582907 585079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00068 8 266 C3H Transcription Factor Family AT2G35420 33.969 4.51e-39 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00972 1 3066845 3067729 Pste7g00068 7 582907 585079 PCT