Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00063 TATGTGAGAAGCAGTGGTTTAACAGAAAAAAAGGTGATCAAAGTAGAAAATCAGAGAAAATTTGAGTGGAAAATGCACGGGAAAAAGGAGCAAGAAGATTATATAAGGAAAGGGCCATGGAAAGCAGAAGAAGATGAGGTGCTACTGAACCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAGGGTCTTCTTCACAGGACTGGCAAGTCATGTCGTCTTCGTTGGGTCAATAAGCTTCGACCAAACCTCAAGAAGTCAGTCATTGTTTCTTTCATTTTCTCCTTACTCTGTGCATGTATCCATATATGGTTTGGTTGCAAGTTTTCACTTGAGGAAGAGAAGGTAGTAATAGAGTTGCAGGCACAATTTGGGAACAGGTGGGCTAAGATTGCATCCTATTTGTCAGGGAGAACAGACAATGATGTGAAAAATTTCTGGAGCAGTAGGCAAAAAAGATTGGCTAGGATTCTGCATACATCAGCAACAACTCCCAAATCAAAGAAAAATAAAACTAAAGTTCCTACCTTTCTTGATGTTCCAACTTTGGAGGCTCCTAAGCTCAGTTCATCATCAGAGGGAGAGCCATCATCAAAGCCTCAGTCATATCCACTAGAGTACATTGAGAATTCTGAGGTTATCAAAATGGTGTCTTTGCCAGATCTTATGAAGTCTCAGATCGAGTTGCCTACTTCTTACACAAGTCATGTGGAACAAGAGTTAACCCCTTTTGAGAGCTATAAAAGCACTGAACAGTGTCAACAAATTTCCTTTCCTCAGATTCCAGAACTTCCTAATCATCTGGCATTCCCAATGGAAAGTCAAGATCTATTGCCCAGAATTGATGAGCCATGTTTCATTGAAGACTTTTGTCCTCTTGATGCATCTGAGTTTGAAATAGGTTCACAACACCCCATTGGGTTCCCTTTCTTTGAGTCACCAGCAAGTTACAGAATTGGGACAGGGGATGCAATTGGTAACACCAAAAGCTGTGACAGCTTCTTCGATGATTTCCCTGTGGACATGTTTGATCACATGGACCCACCTGCAAGCCCTTCAAACCACTGA 1080 0.4157 YVRSSGLTEKKVIKVENQRKFEWKMHGKKEQEDYIRKGPWKAEEDEVLLNHVKKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRPNLKKSVIVSFIFSLLCACIHIWFGCKFSLEEEKVVIELQAQFGNRWAKIASYLSGRTDNDVKNFWSSRQKRLARILHTSATTPKSKKNKTKVPTFLDVPTLEAPKLSSSSEGEPSSKPQSYPLEYIENSEVIKMVSLPDLMKSQIELPTSYTSHVEQELTPFESYKSTEQCQQISFPQIPELPNHLAFPMESQDLLPRIDEPCFIEDFCPLDASEFEIGSQHPIGFPFFESPASYRIGTGDAIGNTKSCDSFFDDFPVDMFDHMDPPASPSNH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00063 359 PANTHER TRANSCRIPTION FACTOR DUO1 110 358 - -
Pste7g00063 359 SUPERFAMILY Homeodomain-like 35 151 IPR009057 -
Pste7g00063 359 ProSiteProfiles Myb-like domain profile. 112 155 IPR001005 -
Pste7g00063 359 FunFam Transcription factor GAMYB 111 180 - -
Pste7g00063 359 CDD SANT 112 151 IPR001005 -
Pste7g00063 359 Pfam Myb-like DNA-binding domain 112 151 IPR001005 -
Pste7g00063 359 Gene3D - 37 90 - -
Pste7g00063 359 SMART sant 109 157 IPR001005 -
Pste7g00063 359 SMART sant 36 86 IPR001005 -
Pste7g00063 359 CDD SANT 39 84 IPR001005 -
Pste7g00063 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 88 IPR017930 -
Pste7g00063 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 159 IPR017930 -
Pste7g00063 359 Pfam Myb-like DNA-binding domain 40 91 - -
Pste7g00063 359 FunFam MYB transcription factor 37 89 - -
Pste7g00063 359 Gene3D - 112 180 - -
Pste7g00063 359 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00063 Pste-Chr7 512010 514137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00063 24 356 MYB Transcription Factor Family AT3G60460 45.029 9.95e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g00063 Myb_DNA-bind_6 4.5e-12 CL0123