Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00048 ATGGAAGCTAACGCCAAAAACATTCCCCCCTTTGAAATCTCCCATGGTGGACGCCACAGGGTTCGTCCCAAAAGCAGCGTTCAATTTGACGATAACATGGTCTTACACGAGGACAATGCCAGCCTTATCTATGTAAATGATGCCATAAAGACTAACCAAAATTATGACTTTTCCGGGAATGAGATCCGAACCAGCAGATACACTCTCCTCACCTTCGTGCCAAAGAATCTTTTCATTCAGTTTCACCGAGTCGCTTATCTCTATTTCCTTGCCATTGCTGCTCTCAACCAGCTTCCTCCGCTTGCTGTTTTTGGCCGAACCGTCTCCCTTTTCCCCCTTTTGTTTGTGCTTTGCGTCACAGCTATCAAGGATGCCTATGAGGATTGGCGCAGGCATAGGTCTGATCGCAATGAAAACAATCGAGAGTCTTCGGTTCTTCAATCAGCTCACTTCCGCCCCAAGAAATGGAAACACATACAGGCTGGTGATGTTGTTAAAATATTTGCCAATCAGATGATTCCCGCCGACATGATCTTGTTGGGGACCAGTGACCCCAGCGGCATTGCCTATATTCAGACTATGAATTTGGACGGAGAATCCAATTTGAAGACAAGGTATGCTAAGCAGGAAACTGTTTCATCTGTGTCTCCAGATGCTTGTGCTGTCTCTGGATTCATTAGATGTGAGCCACCTAATCGGAATATTTATGAATTCACCGCCAACATGGAATTCAATGGTTGTAAGTTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGTGTGCTGAAGAACACAGATTGGATAATTGGTGTGGTGGTTTATGCCGGACAGCAAACAAAAGCAATGATGAACAGTGCCGCTTCCCCTTCCAAGAGGAGCAAACTTGAAAGTTACATGAACAGAGAAACATTTTGGTTGTCGGTTTTTCTTTTTATCATGTGTGCAGTTGTTGCCTTTGGGATGGGTCTCTGGCTGTTACGCCACAAGGATCAGCTTGATATCTTGCCTTACTACAGAAAAACATACTTCAACAATGGGCCGAATAAGGGAAAGATATATAGGTATTACGGGATACCCATGGAAACATTCTTCTCTTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTATACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCGTACTTCATGATAGAGGACAGGGATATGTATGACACTAACGCTGGATCAAGGTTCCAGTGTAGATCATTAAATATCAATGAAGATTTGGGTCAGATACGCTATGTGTTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAGTTTCAGAGAGCTAGTGTGCATGGAAAGAACTATGGGAACTCCTTGCTTACGACAGATAATAATACAGCAGCAGCTAATAGTGCTAAACGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATATCATTGTTGCATCAAGACTCAAATAGAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTAACTTTGGCTGCTTGTAATACTGTGATCCCCATTATCAGTAACAGTACAATTTCCAGTTGTGGGAAAGGAGAATCAAATGAACTCATAGAAAGTATAGATTACCAGGGTGAATCTCCTGATGAACAAGCCTTAGTTTCTGCTGCCTCTGCATATGGATATACTTTATTTGAGCGAACATCTGGAAACATTGTTATTGATGTTAATGGCGAGAAACTCAGGTTGGACGTATTGGGCATGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTATTATCCGGTTTCCTGACAATGTTATTAAGGTGTTGGTTAAAGGCGCTGACACTTCAATGTTTAACATTTTAGCACCGGACAATGCAGTTAATATCGGCATTCGGCACGAAACTCAGGAACATTTAAGTGAATATTCTATGCAAGGTTTACGAACTCTTGTAGTTGCCTCCAGGGATCTTTCAGATGCTGAACTTGAGGAATGGCAAAGCACGTATGAAGAAGCGAGCACTTCATTGACTGATCGAGCTGCAAAACTACGTCAAACATCGGCTCGTATAGAATGCAACCTAAAGCTACTTGGAGTTACTGGAATTGAGGACAAGCTGCAGGAAGGTGTACCAGAAACCATTGAGTCCATGCGCCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGCTCTTTCTTGTAAACTTCTAAGTGCAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGCTTGCAGAAATCTCTTGGCTGATGCTAAAGCGAAGTATGGTATTGGTGTGAAATCTTCAAGTAGAGAACACAAAGTTGATTTTAGCCATATTCCCAATGATACAAAGTCCTTGAACAAGGCAAAGTGGAATCCAGGAAAGGAAAAAGGAACTACTGCTCCGTTGGCACTAATAATTGATGGAACCAGTTTGCTTTTCGACCTTGCAATTTCCTGTAGGGTTGTCCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATTAAAAGCCGCACAGATGATCTCACATTAGCTATAGGTGACGGAGCAAATGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGACGCCAAGCAGTGATGGCATCAGACTTTGCTATGGGACAATTCAAGTTCTTGAAAAAATTGCTTTTAGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACTGATTGGAGTAGTGTACTTTATTCCGTGATATACACGTCTATCCCTACTGTCATTATTGGTGTTCTAGACAAAGACTTGAGTGATAGGACACTCTTGGAGTATCCAAAATTGTATGGTACAGGTCACCGACATGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACATTATGGCAGAGTCTTGTTCTTTTCTACATCCCTGTATTCATCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTCTGTGGACAATTTCAGTTGTTATCCTTGTCAATGTACACCTGGCTATGGACATTAACCAATGGGCACTAATTAGTCATGTTGCTGTATGGGGATCGATAATCGTTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAATTTCGGGACTATTTATCAATTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAGTAATTGTGGCATTGCTACCCCGCTTTCTTTGCAAATCTGTTTATCAAATCTTTTGTCCTTCAGATATCCAGATAGCTAGAGAAGCTGAGATAATGAGAAAACAGCATGATGATTTGCAGTCAAGGCTACAAGTTTCCAATTAA 3480 0.4135 MEANAKNIPPFEISHGGRHRVRPKSSVQFDDNMVLHEDNASLIYVNDAIKTNQNYDFSGNEIRTSRYTLLTFVPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDRNENNRESSVLQSAHFRPKKWKHIQAGDVVKIFANQMIPADMILLGTSDPSGIAYIQTMNLDGESNLKTRYAKQETVSSVSPDACAVSGFIRCEPPNRNIYEFTANMEFNGCKFPLNQSNIVLRGCVLKNTDWIIGVVVYAGQQTKAMMNSAASPSKRSKLESYMNRETFWLSVFLFIMCAVVAFGMGLWLLRHKDQLDILPYYRKTYFNNGPNKGKIYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDTNAGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGNSLLTTDNNTAAANSAKRRWKLKSEIAVDSELISLLHQDSNRDERIAAHEFFLTLAACNTVIPIISNSTISSCGKGESNELIESIDYQGESPDEQALVSAASAYGYTLFERTSGNIVIDVNGEKLRLDVLGMHEFDSVRKRMSVIIRFPDNVIKVLVKGADTSMFNILAPDNAVNIGIRHETQEHLSEYSMQGLRTLVVASRDLSDAELEEWQSTYEEASTSLTDRAAKLRQTSARIECNLKLLGVTGIEDKLQEGVPETIESMRQAGIKVWVLTGDKQETAISIALSCKLLSADMQQIIINGTSEVACRNLLADAKAKYGIGVKSSSREHKVDFSHIPNDTKSLNKAKWNPGKEKGTTAPLALIIDGTSLLFDLAISCRVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFKFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTVIIGVLDKDLSDRTLLEYPKLYGTGHRHEAYNMQLFWITMIDTLWQSLVLFYIPVFIYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALISHVAVWGSIIVTYGCMVVLDSIPVFPNFGTIYQLARSPTYWMTILLIVIVALLPRFLCKSVYQIFCPSDIQIAREAEIMRKQHDDLQSRLQVSN 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00048 1159 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Pste7g00048 1159 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1143 - -
Pste7g00048 1159 NCBIfam phospholipid-translocating P-type ATPase 57 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste7g00048 1159 Gene3D - 440 476 IPR023299 GO:0000166
Pste7g00048 1159 Gene3D - 699 905 IPR023214 -
Pste7g00048 1159 Gene3D - 534 698 IPR023299 GO:0000166
Pste7g00048 1159 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Pste7g00048 1159 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Pste7g00048 1159 SFLD p-type atpase 414 916 IPR044492 -
Pste7g00048 1159 Gene3D - 427 439 IPR023214 -
Pste7g00048 1159 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1131 IPR023298 -
Pste7g00048 1159 SUPERFAMILY HAD-like 417 909 IPR036412 -
Pste7g00048 1159 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Pste7g00048 1159 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 437 704 IPR023299 GO:0000166
Pste7g00048 1159 Gene3D - 115 287 - -
Pste7g00048 1159 FunFam Phospholipid-transporting ATPase 541 676 - -
Pste7g00048 1159 Pfam E1-E2 ATPase 145 388 - -
Pste7g00048 1159 CDD P-type_ATPase_APLT_Dnf-like 59 1025 - -
Pste7g00048 1159 NCBIfam HAD-IC family P-type ATPase 363 454 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g00048 1159 NCBIfam HAD-IC family P-type ATPase 831 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g00048 1159 Pfam haloacid dehalogenase-like hydrolase 426 748 - -
Pste7g00048 1159 Gene3D - 413 426 - -
Pste7g00048 1159 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Pste7g00048 1159 FunFam Phospholipid-transporting ATPase 699 905 - -
Pste7g00048 1159 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1133 IPR032630 -
Pste7g00048 1159 SFLD C1.7: P-type atpase like 414 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00048 Pste-Chr7 396827 402926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00048 12 1142 Primary Pumps ATPases AT5G04930 55.256 0.0 1290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01807 5 11419545 11427938 Pste7g00048 7 396827 402926 PCT