Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00013 GAAATTTTGGTGTGAGACTAATTTTAGCAAGCGCCTCTTCTCCCTTCCATTGGGTGGCAACTGTTAGATCCGAAATTAGTCAAATTGATAAAACAAAAATGTGTTTGCAAACCTCAAAATAAAATACCACATTTTTGGTCACCAAATGAGTTTGGGAAGAGAAATCATAGAATAGATAGCATTTGAAAGAGAGGAATCGGGTAATGGAAGGATTGGATGGTTTGATACAGAGGCTTTTGGAAGCAAGGAAGAACAGGGGCAAACGGATTCAACTAATAGAGACAGAAATTCGCAGCCTTTGCGCGACGGCAAAAGATGTGTTCCTGAGCCAGCCAAACCTGCTGGAATTGGAAGCTCCCATTAACGTTTGCGGTGACATACACGGGCAATATCCGGACCTGTTGCGAGTGTTCGAGTACGGTGGGTTTCCGCCGGATTCAAATTACCTATTCCTCGGGGACTACGTTGACAGAGGAAAACAGAGCGTGGAAACAATATGCCTGCTGCTTGCGTACAAGATAAAATACCCAGAAAACTTTTTCCTTCTACGAGGAAACCACGAGTGTGCCTCGATTAACAGAATCTATGGGTTTTACGACGAGTGCAAGCGCAGATTCAGTGTTCGTCTGTGGAAGATATTCACAGATTGCTTCAACTGTTTGCCCGTAGCTGCAGTGATCGACGACAAAATCCTATGCATGCACGGTGGGCTTTCCCCAGACATGGAGAGCTTGAATCAGATAAAAGCCATAGAAAGGCCCGTGGACGTGCCAGACCAGGGCCTCTTATGTGACCTCCTCTGGGCTGATCCAGACAACGAAATCAGAGGGTGGGGCGAGAATGATAGGGGCGTTTCCTACACCTTCGGCCCCGACAAGGTCGCCGAGTTCCTGAAGAAGCACGATCTCGATCTCATTTGCAGAGCCCATCAGGTCGTCGAAGATGGCTATCAATTCTTCGCTGACAGGCAGCTCGTTACCATCTTCTCTGCCCCTAATTATTGCGGGGAATTCAACAACGCCGGTGCCCTCATGTGCGTCGACCAAACTTTACTTTGTTCCTTTCAGATTATCAAACCCCAGGGCTTGAGACCCAAACTCACTTAATCCACCACAAACCCTTGTACTTGTATATATGCATATCCGTATTTCATCCACACAATTTAGGGCACAATTTCTGCACTAGATACTAGTATCATTTCATTTTCTTATTATACAAAACTCAAG 1226 0.4584 MEGLDGLIQRLLEARKNRGKRIQLIETEIRSLCATAKDVFLSQPNLLELEAPINVCGDIHGQYPDLLRVFEYGGFPPDSNYLFLGDYVDRGKQSVETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPDMESLNQIKAIERPVDVPDQGLLCDLLWADPDNEIRGWGENDRGVSYTFGPDKVAEFLKKHDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDQTLLCSFQIIKPQGLRPKLT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00013 300 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 8 292 - -
Pste7g00013 300 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Pste7g00013 300 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Pste7g00013 300 FunFam Serine/threonine-protein phosphatase 1 294 - -
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Pste7g00013 300 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Pste7g00013 300 Gene3D - 2 298 IPR029052 -
Pste7g00013 300 SMART pp2a_7 24 294 IPR006186 GO:0016787
Pste7g00013 300 CDD MPP_PP1_PPKL 4 292 - -
Pste7g00013 300 SUPERFAMILY Metallo-dependent phosphatases 21 295 IPR029052 -
Pste7g00013 300 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00013 Pste-Chr7 89454 90762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00013 31 240 Calmodulin-binding Proteins AT5G63870 30.400 6.87e-30 113