Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00007 ATGGCTGCAGATGGGAACCCCAGAACTTGGATTCCCTATACGAACAACAAAGACTGTTCTCAAGGATTTTGTAGCTTGTATTGTCCACAATGGTGTTACATTGTGTATCCTCCTCCTCCACCTTTTGACTACCCAGATGATGATTCAAGCCCAAATTTTTCCCCTCTTGTCATTGCAATCATTGGGATCTTGGCCACCACTTTTCTTCTGGTGAGTTACTACACTCTAATATCCAAGTATTGTGGCCCTAGAGAGTCTCCAAGGAGAGACCCAAATGAAGACTTAGAAAATCACAATCACAATCACAATTCTTCCCTCCAAGAACCATTTCATGCTTCAACCACAGGCCTTGATGAGTCTCTAATAAAATCCATTGCAGTTTTCAAGTACAAAAAGGGGGTTGGTGGTTCTGTTGCAGTCACAGATTGTTCAGTTTGTCTCAGCGAGTTTCAAGATGATGAAAGTGTTAGACTCTTGCCAAAGTGCAGCCACGTTTTCCATGTTCCTTGCATTGACACATGGCTCAAGTCTCACTCTAGCTGCCCCTTGTGCCGTGCTAGCATATTCACCTTCAACACTTCATCAATTCAAGTTCACACCCCAGACACCCCAGACGTAGAGTTCACTTCTTCAAGGAATGAAACTTCTGAAAATGAAAGCATTGGAAGTGGCAATGAGTTTGAAGAAGCAACCATACATCATTCTAGAACTCATCCAAAGCCTGCATTGCGTGCTTTCAGCGACTTAAGCAGTTTTCAAAGGAGGCATAGAGTTATTGAAATTAGAGATGAAGTGTGTGAATCCATTAACAGGTCAGCGTCTATGGACCATTCCTATCAAAATTCTCTTTCTGTTGCTGATGTGTTGCAGATGAATCATCATGAAGATGAAGACTCACAAGGTGAAGGGTGTTACACTACTGAAGCTGGTCCTTCAAAGAGGTCACGTGGAGAATGTAGCAAGTCCAAATACAAAACAAGGGTGCTTCATTGTGTGTTGAGTCCAATTGCAATGAAGAGATCATTTTCCAGTGGAAGATTCTCAGTTTGCAAAACTGGTGGCAGAGGAAGGCATGGAACTATACCAATATGA 1092 0.4249 MAADGNPRTWIPYTNNKDCSQGFCSLYCPQWCYIVYPPPPPFDYPDDDSSPNFSPLVIAIIGILATTFLLVSYYTLISKYCGPRESPRRDPNEDLENHNHNHNSSLQEPFHASTTGLDESLIKSIAVFKYKKGVGGSVAVTDCSVCLSEFQDDESVRLLPKCSHVFHVPCIDTWLKSHSSCPLCRASIFTFNTSSIQVHTPDTPDVEFTSSRNETSENESIGSGNEFEEATIHHSRTHPKPALRAFSDLSSFQRRHRVIEIRDEVCESINRSASMDHSYQNSLSVADVLQMNHHEDEDSQGEGCYTTEAGPSKRSRGECSKSKYKTRVLHCVLSPIAMKRSFSSGRFSVCKTGGRGRHGTIPI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00007 363 CDD RING-H2_EL5-like 142 185 - -
Pste7g00007 363 SMART ring_2 143 184 IPR001841 -
Pste7g00007 363 MobiDBLite consensus disorder prediction 85 101 - -
Pste7g00007 363 PANTHER RING-H2 FINGER PROTEIN ATL16 41 303 IPR044600 GO:0016567|GO:0016740
Pste7g00007 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 189 IPR013083 -
Pste7g00007 363 SUPERFAMILY RING/U-box 142 191 - -
Pste7g00007 363 MobiDBLite consensus disorder prediction 294 319 - -
Pste7g00007 363 FunFam E3 ubiquitin-protein ligase ATL6 105 190 - -
Pste7g00007 363 Pfam Ring finger domain 142 185 IPR001841 -
Pste7g00007 363 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Pste7g00007 363 MobiDBLite consensus disorder prediction 85 109 - -
Pste7g00007 363 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00007 Pste-Chr7 60263 61354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00007 1 341 C3H Transcription Factor Family AT3G03550 41.240 3.13e-66 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00007 7 60263 61354 Pste7g00007 7 60263 61354 ECH
Pste1g00978 1 3082829 3083914 Pste7g00007 7 60263 61354 PCT