Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04608 atgatcataaggggccaagacattgtaagtgaatctccctcttctagtgaaagtgaggaagaagggggtcatgggcattttgatataaagggttttccttatgatgaggacttacttttgccaaacttccggaaggtaattgggcagctaaggcagactgaagttattcctcctgttcaatctgcaaagaagctttcccagtcaaaagaatctaagcccaagttaaaagacgaaaggaaggaggctaagaaaggggccaaggagccagagaagcccaaagaagcagaagaggagacacccaaacccaaacccaaacccaagaatatccttgatcttctccctccaagagtctactcaaacactaaaacaaacttcagggaggttgccattaaagcagatggatttggatggatttggctcgcaagtatgcatttggaaaagatgcttgtgattggatcagacccaccatataaggtgaagggacggtggcttttccgtggacaagaaatcccacaatttgtgattgatgaatgctatgacatggagctctatgaatggactgaggttgacgtctctgatgaagttcaaaaggaacgtgtcaatcaaatgattgaagattgtgaactttttgagggaagcagaaagggtgaaaagaatgcatgcatctggaccgttgatttgaggcgtttggacggtgaggatcgcgtcaattcatctggggtacgctcctccaaaatgtcttcctctttgttttctagttacattccttcttattctttcccgtctcagggtgatgcctcaaacttaatcgaagtcacccctttcagggaggggagcaatgtttgctccgctacccgccctcctgctggttcctcaactgcaagcgagctttctctctttccaaaggaccaaagagtcttgaggctcctacatgcaagcgggttgggaatcccaaaagggaattcccccctattctggacccgaagcattattatggatgggagtggcaacattatgaacttccgaaagagcagacgtgctttggttggggctgaggaggaagccatccctcagcaagtattcgaggtggatcctccgccgagggatcctctagtagatgttacccttcccatgacggagcatgggaatgggaagtcaaaacaaagggagaaagagcccgagaaagggaaagataaggggaaaaggaataacaaagagggcaagaagtcttcattcaataggtcaggaacacctggccaacgtagaccctactctccactaggtgcattattgcaagctttggattgccatctctttaccattgagatgactaagatgaggcaacaactaagacattttgagggatcgttagaggtgaccaccaaagtcgtggactcgttgaacatcgaggtggcagagatgaaggagagatccaaaaccatggtctcagctgaagaccatgacgctacactcaagcagaaagacaaaaaaataaaggaagcaatgaagaggtataggggaccgatgctcataggtagagtaagaggagtcactgttcgtgtggaggaagaagatgaaggcgtcggggaggtggatggcggtgggaacgttgaggtttag 1620 0.0 MIIRGQDIVSESPSSSESEEEGGHGHFDIKGFPYDEDLLLPNFRKVIGQLRQTEVIPPVQSAKKLSQSKESKPKLKDERKEAKKGAKEPEKPKEAEEETPKPKPKPKNILDLLPPRVYSNTKTNFREVAIKADGFGWIWLASMHLEKMLVIGSDPPYKVKGRWLFRGQEIPQFVIDECYDMELYEWTEVDVSDEVQKERVNQMIEDCELFEGSRKGEKNACIWTVDLRRLDGEDRVNSSGVRSSKMSSSLFSSYIPSYSFPSQGDASNLIEVTPFREGSNVCSATRPPAGSSTASELSLFPKDQRVLRLLHASGLGIPKGNSPLFWTRSIIMDGSGNIMNFRKSRRALVGAEEEAIPQQVFEVDPPPRDPLVDVTLPMTEHGNGKSKQREKEPEKGKDKGKRNNKEGKKSSFNRSGTPGQRRPYSPLGALLQALDCHLFTIEMTKMRQQLRHFEGSLEVTTKVVDSLNIEVAEMKERSKTMVSAEDHDATLKQKDKKIKEAMKRYRGPMLIGRVRGVTVRVEEEDEGVGEVDGGGNVEV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04608 539 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 147 224 IPR001662 GO:0003746|GO:0006414
Pste6g04608 539 MobiDBLite consensus disorder prediction 17 31 - -
Pste6g04608 539 MobiDBLite consensus disorder prediction 383 409 - -
Pste6g04608 539 MobiDBLite consensus disorder prediction 57 112 - -
Pste6g04608 539 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 140 222 IPR036433 GO:0003746|GO:0006414
Pste6g04608 539 MobiDBLite consensus disorder prediction 358 425 - -
Pste6g04608 539 Coils Coil 457 477 - -
Pste6g04608 539 MobiDBLite consensus disorder prediction 1 31 - -
Pste6g04608 539 SUPERFAMILY eEF1-gamma domain 143 210 IPR036433 GO:0003746|GO:0006414
Pste6g04608 539 Coils Coil 484 504 - -
Pste6g04608 539 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 40 131 IPR044628 GO:0004364
Pste6g04608 539 SMART EF1G_2 105 169 IPR001662 GO:0003746|GO:0006414
Pste6g04608 539 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04608 Pste-Chr6 35339066 35348739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04608 41 212 Eukaryotic Initiation Factors Gene Family AT1G57720 46.296 3.36e-38 143