Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04537 atgagtgaaagaatattagtagttctgctacttgttttgaattatttgttggttgcagaaggaggaacagctgatgaggatttaagcacacttttgtctcttaaggatacctggaagaacacccctcctaattgggtgggttcggatccttgtgatgattgggatggaatcaagtgcaagaattcacgcattacatcaataacattagcaagcaccggtttggctggtggtctttctggagatattggatcactatctgaattagagactttggatctatcttacaacaaggacttgactggaccgcttccacaatctattggggagttgaagaagctgacaaccttaattcttgttggttgtaaattcactggtcctattccaggcagcataggaaagctgcaggcgctcctctacttatctttaaattccaatagctttagtggagcaattccgcattctattggtaatctatcaaagcttcattggttagatttagctgaaaatcaacttgaagggaacatcccggtatctagtggggacatatctggccttgataagttacaccatgccaagcattttcatcttgggaagaataatctctcaggcagtattcctcctcaactttttagctcggaaatggagctgattcatttgcttttggaaagcaatcaactcactggcgacattccacccacgcttggactagttcagagtctggaggtggtgcgcttagataccaattcattacgtggatctgtgcctccaaacatcaacaatcttacaaatgttcaagatctgtacttgtccaacaataaactaacaggctctctgccaaaccttacaggaatgaatgccctcagctacttggacatgagcaacaatagtcttgaaccattggattttccaggatggttttcaactctgaattccttaacaacattaaagatggagaacacacaacttcaaggacaggttcctagttctttgtttggacttgtcaatttacagactgtactcaaagataacccaatttgccaagaaagtgataaaattcagaccagcagctattgcttcccttctcaacccaatgtctcatattcaacaccaccaaataactgtcaacctggtgcctgcagttcagaacagattcctagtcccaactgtatatgctcatatccatatacaggaatcttagctttcaggtcaccttccttttcggacttagagaacaaaactcactacttaatgcttgaggaatttcttatgcgatcttttaagtcacattttgtatctgtggattcggtttcgctgagcaatccgactaaggattcaactcagtatctcaaattgaacttacaagtcttcccatcaggacaagatcatttcaatcgaacagggatctcaagcactggttttctgctaagcaaccagacttttaagcctcctaaagattttggaccattttattttcttgctgataaatatgatcactttgggaactctggatttagcgtatcgagtaaatcttcaaacattggaatcataattggggcagcagttggtggttcggtcttgctactgttattactcctagcaggactttatgcattccgccaaaagaaaagggccgaaaaagcgattggacaaagcaaccctttcagacgttgggatacagttgagagcaacagtgaggtccctcagttgaaagaagcaaggctgttttcttttgaagagcttaaaaaatacaccaaaaatttttctcaactcaacgatattggatctggggggtttgggaaggtttataagggtagccttccaaatgggaagctgatagcaataaaacgagctaaaaaagaatcaatgcagggaaagcttgagtttaaagcggagattgagctcctatcaagggtccaccataagaatcttgtcagcattgtaggattctgctttgaccaaggagaacaaatgctggtttatgagtatgttccaaatggaactttaaaggacgctctctcagggaagtcgggaattaggttggattggattagaagggtaaaagttgcccttggtactgctcggggtttggcttatcttcacgagcttgttaatcctcccatcatacatagggacatcaaatccaacaatattttgcttgatgaccgccttaatgccaaagttgctgattttggtctctccaagtctatccttgattgtgaaaaggatcatgtcaccactcaagtcaaaggaaccatgggttacttggatcctgagtattatatgtctcaacaattgaccgagaagagtgacgtttatagctttggagtgctaatgttggagctgatatctgcaagagggccattggaacgagggaggtatattgtaaaagaggttaagaaagcagttgataagacaaaagagttatatggtcttaatgaaattattgacccaaccataaccattagtttaggttccacactgagcggttttgaagagtttatggatatgagcatgagatgtgtagaagaggaaggaggtaataggcctaaaatgagtgatgtggtgagagaattggagaacatcttgaagtcagcaggtgtaaaccctagtgaggaatcggtatcaccttccatctcttctagttatgaagacgtcagcagaggaagctccacccatccttataacagcaacgacacctttgacttcagtgctggacttccatatccaaaacttgatcctcagtaa 2745 0.0 MSERILVVLLLVLNYLLVAEGGTADEDLSTLLSLKDTWKNTPPNWVGSDPCDDWDGIKCKNSRITSITLASTGLAGGLSGDIGSLSELETLDLSYNKDLTGPLPQSIGELKKLTTLILVGCKFTGPIPGSIGKLQALLYLSLNSNSFSGAIPHSIGNLSKLHWLDLAENQLEGNIPVSSGDISGLDKLHHAKHFHLGKNNLSGSIPPQLFSSEMELIHLLLESNQLTGDIPPTLGLVQSLEVVRLDTNSLRGSVPPNINNLTNVQDLYLSNNKLTGSLPNLTGMNALSYLDMSNNSLEPLDFPGWFSTLNSLTTLKMENTQLQGQVPSSLFGLVNLQTVLKDNPICQESDKIQTSSYCFPSQPNVSYSTPPNNCQPGACSSEQIPSPNCICSYPYTGILAFRSPSFSDLENKTHYLMLEEFLMRSFKSHFVSVDSVSLSNPTKDSTQYLKLNLQVFPSGQDHFNRTGISSTGFLLSNQTFKPPKDFGPFYFLADKYDHFGNSGFSVSSKSSNIGIIIGAAVGGSVLLLLLLLAGLYAFRQKKRAEKAIGQSNPFRRWDTVESNSEVPQLKEARLFSFEELKKYTKNFSQLNDIGSGGFGKVYKGSLPNGKLIAIKRAKKESMQGKLEFKAEIELLSRVHHKNLVSIVGFCFDQGEQMLVYEYVPNGTLKDALSGKSGIRLDWIRRVKVALGTARGLAYLHELVNPPIIHRDIKSNNILLDDRLNAKVADFGLSKSILDCEKDHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLMLELISARGPLERGRYIVKEVKKAVDKTKELYGLNEIIDPTITISLGSTLSGFEEFMDMSMRCVEEEGGNRPKMSDVVRELENILKSAGVNPSEESVSPSISSSYEDVSRGSSTHPYNSNDTFDFSAGLPYPKLDPQ 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04537 914 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 663 874 - -
Pste6g04537 914 MobiDBLite consensus disorder prediction 866 902 - -
Pste6g04537 914 SMART serkin_6 587 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04537 914 FunFam Leucine-rich repeat protein kinase family protein 553 662 - -
Pste6g04537 914 SUPERFAMILY Protein kinase-like (PK-like) 573 887 IPR011009 -
Pste6g04537 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Pste6g04537 914 ProSiteProfiles Leucine-rich repeat profile. 263 285 IPR001611 GO:0005515
Pste6g04537 914 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Pste6g04537 914 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Pste6g04537 914 PANTHER RECEPTOR-LIKE PROTEIN 55 35 862 - -
Pste6g04537 914 SUPERFAMILY L domain-like 58 374 - -
Pste6g04537 914 Gene3D Phosphorylase Kinase; domain 1 557 662 - -
Pste6g04537 914 Pfam Protein tyrosine and serine/threonine kinase 590 857 IPR001245 GO:0004672|GO:0006468
Pste6g04537 914 MobiDBLite consensus disorder prediction 865 914 - -
Pste6g04537 914 ProSiteProfiles Protein kinase domain profile. 587 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04537 914 CDD STKc_IRAK 593 861 - -
Pste6g04537 914 FunFam Leucine-rich repeat family protein 26 180 - -
Pste6g04537 914 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Pste6g04537 914 ProSitePatterns Protein kinases ATP-binding region signature. 593 619 IPR017441 GO:0005524
Pste6g04537 914 Gene3D Ribonuclease Inhibitor 182 348 IPR032675 -
Pste6g04537 914 Pfam Leucine Rich repeats (2 copies) 262 300 IPR025875 -
Pste6g04537 914 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04537 Pste-Chr6 34684058 34701155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04537 1 914 Receptor kinase-like Gene Family AT5G49760 54.668 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pste6g04537 PK_Tyr_Ser-Thr 7.9e-47 CL0016