Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04516 atgggatcacatgatcacggtaaaggagtcacagatgctgattttgatcgagtgacacaaactcatcatgagctcgttcaatcctatgtgggaagttctgagaaagcaaaagaggcaataatatattcttacacaaggcacatcaatggctttgctgccattctggaagacgaagaagctgctgacattgcaaaacatccagaggttgtgtcagtcttcttgaacaaaggaagaagattacatactactcattcttgggaattcatggacctggaacggaatgatggggtgattccctctgaatcactgttcagaaaagccagatatggtgaagatactattattgcgaatcttgacactggtgtatggccagaatcaccaagctttagagatgagggtatggaagtcataccatcaaggtggaaaggaacttgtcaacatgacatcaccggcttccgttgcaacaggaagctgataggagcaaggtacttcaacaaagggtatattgcctatgcaggagcagatgcaaaatttaacagtacactgaacacagcacgagactatgagggccatggatctcacacactttcaacaataggaggagcctttgttcctggggcaaatgtttttggcatgggaaatggaacagccgaaggtggttctccgaaggcccgacttgctacttacaaggtatgctggccaccacttgatggcaacgagtgctttgatgctgatatcattgcagcctttgacatggccatatatgatggggttgatgttctttccctctctctgggagggcttgctacggattactttgatgatggcctcgcaatcgccgcctttcatgctaacaacaagggcatccctgtcatatgctctgctggaaattccggaccaacacctggatctgtttccaatgttgcaccttggatattaacagttggtgcaagcaccttggatagagagtttgacactattgttcaactccacaatggacaacgctttaagggaacaagtctttctagagctttgccagaaaacaagttttacccactcatcaatgctgcagacgcaaaatcggctaatgaatcagttctaaacgctactctctgtttgcgaggagcaattgaccccgagaaggtgaggggaaaaatattggtttgccttagaggtagcattgcaagagtggaaaagagcctggtcgctttggaggctggtgcagttgggatgattctttgtaatgacatgcttagtggtaatgagcttattgcagatccacatctcctacctgcgtcacaaattaattatgaagatggtgttgctgtctatgcctacatgaattcaaccaagaatccggtaggatattttgatccaccaaagaccaagttgcagacaaagcctgctccagtgatggcagctttctcctctagagggcccaacacagtgacaccagagatcctcaagcctgatgtcactgctccgggtgtgaacattattgctgcatactcagaagctgttagcccgacagatatggcgtttgataagcgcagggttccttttatcaccatgtctggaacatccatgtcttgtcctcatgtcgctggagttgttggccttctcaaaactctccaccccgactggagtccagctgctattaaatctgcaataatgacaactgctaggacaagggacaacactggtaagccaatgcttgatgggggggattatagtaaggcaacgccacttgcctatgggtctggccacattagaccaaaccgtgcaatggatcccgggttggtctacgatttaaccacccatgattacctacactttctctgtttctctggctataaccaaactcagataaacaagttctctggtgctgattaccgttgtcccggtgtcataaacatcctggattacaactacccttcggtaacaataccaaaactgtacagctcagttagtttcacacggaggctgaaaaatgttgggtcaccagccacttatagtgcaagcctcaaagtacctgcaggtctttccataactgtgcagcctaatgtgttgaaatttgacaacattggtgaagagaagagctttaagttgacagtgcaagttacaagaccaggcaaggctacagcgtttggaggtataacttggtcagatggcaaacatcaagtcaggactcctattgtggttgggggagttagagggtag 2220 0.0 MGSHDHGKGVTDADFDRVTQTHHELVQSYVGSSEKAKEAIIYSYTRHINGFAAILEDEEAADIAKHPEVVSVFLNKGRRLHTTHSWEFMDLERNDGVIPSESLFRKARYGEDTIIANLDTGVWPESPSFRDEGMEVIPSRWKGTCQHDITGFRCNRKLIGARYFNKGYIAYAGADAKFNSTLNTARDYEGHGSHTLSTIGGAFVPGANVFGMGNGTAEGGSPKARLATYKVCWPPLDGNECFDADIIAAFDMAIYDGVDVLSLSLGGLATDYFDDGLAIAAFHANNKGIPVICSAGNSGPTPGSVSNVAPWILTVGASTLDREFDTIVQLHNGQRFKGTSLSRALPENKFYPLINAADAKSANESVLNATLCLRGAIDPEKVRGKILVCLRGSIARVEKSLVALEAGAVGMILCNDMLSGNELIADPHLLPASQINYEDGVAVYAYMNSTKNPVGYFDPPKTKLQTKPAPVMAAFSSRGPNTVTPEILKPDVTAPGVNIIAAYSEAVSPTDMAFDKRRVPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPAAIKSAIMTTARTRDNTGKPMLDGGDYSKATPLAYGSGHIRPNRAMDPGLVYDLTTHDYLHFLCFSGYNQTQINKFSGADYRCPGVINILDYNYPSVTIPKLYSSVSFTRRLKNVGSPATYSASLKVPAGLSITVQPNVLKFDNIGEEKSFKLTVQVTRPGKATAFGGITWSDGKHQVRTPIVVGGVRG 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04516 739 SUPERFAMILY Subtilisin-like 80 600 IPR036852 GO:0004252|GO:0006508
Pste6g04516 739 FunFam subtilisin-like protease SBT1.5 321 464 - -
Pste6g04516 739 CDD PA_subtilisin_like 328 455 - -
Pste6g04516 739 Gene3D - 613 736 - -
Pste6g04516 739 Pfam PA domain 352 441 IPR003137 -
Pste6g04516 739 CDD Peptidases_S8_3 80 561 IPR034197 -
Pste6g04516 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Pste6g04516 739 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Pste6g04516 739 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Pste6g04516 739 PRINTS Subtilisin serine protease family (S8) signature 110 129 IPR015500 -
Pste6g04516 739 Pfam Fibronectin type-III domain 641 734 IPR041469 -
Pste6g04516 739 ProSiteProfiles Serine proteases, subtilase domain profile. 85 596 - -
Pste6g04516 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Pste6g04516 739 Pfam Subtilase family 110 566 IPR000209 GO:0006508|GO:0008236
Pste6g04516 739 FunFam Subtilisin-like protease SBT5.3 1 81 - -
Pste6g04516 739 Pfam Peptidase inhibitor I9 12 81 IPR010259 -
Pste6g04516 739 SUPERFAMILY PA domain 380 449 IPR046450 -
Pste6g04516 739 Gene3D - 321 464 - -
Pste6g04516 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 734 IPR045051 -
Pste6g04516 739 FunFam Subtilisin-like protease SBT1.5 112 335 - -
Pste6g04516 739 Gene3D Peptidase S8/S53 domain 112 609 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04516 Pste-Chr6 34488192 34496355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04516 1 734 Subtilisin-like Serine Gene Family AT5G59810 62.652 0.0 944