LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g04479	atggacaaggacgggtatagaagcagcggcatatgtgagatagaggaggaagaggacagccacgagacccaatggcctatagctatagccaccaataccattaacagcgaagaacaagaagactgtgtttatgtagcagtgggtaagggtaagggtaagagcgacacaagcatggacgctctctcatggacactcaacaacttggctacccattctaccatcatttatctcatacatgtattccctgagatcaagcacattccaaatccactgggaataggaatgattccaagaaatcaagtgagtcctgagcaggtggagagttatattgaccaagaaagaggcaagaggagagaggtccttcagaaatttctacaatcatgctctacttccaaggttaaggtagacaccatcctaattgagagtgacctagttgcaaaggctatcctggacctgattcccattcttcaaataagaaatctagtgattggagccaacaaattacatctaagaaaatcaaaatcaaggaaagggaatagcgtaggcgatcagatacttaagaaggctccacaaagttgcaaggtatcgcgtttccttgacaataatgctttcgtatga	618	0.0	MDKDGYRSSGICEIEEEEDSHETQWPIAIATNTINSEEQEDCVYVAVGKGKGKSDTSMDALSWTLNNLATHSTIIYLIHVFPEIKHIPNPLGIGMIPRNQVSPEQVESYIDQERGKRREVLQKFLQSCSTSKVKVDTILIESDLVAKAILDLIPILQIRNLVIGANKLHLRKSKSRKGNSVGDQILKKAPQSCKVSRFLDNNAFV	205

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g04479	205	Gene3D	HUPs	37	198	IPR014729	-
	Pste6g04479	205	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	7	196	-	-
	Pste6g04479	205	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	54	195	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g04479	Pste-Chr6	34091475	34093555	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste6g04479	46	195	Plant U-box Gene Family	AT5G57035	30.000	9.75e-12	61.6

Showing 1 to 1 of 1 entries