Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04479 atggacaaggacgggtatagaagcagcggcatatgtgagatagaggaggaagaggacagccacgagacccaatggcctatagctatagccaccaataccattaacagcgaagaacaagaagactgtgtttatgtagcagtgggtaagggtaagggtaagagcgacacaagcatggacgctctctcatggacactcaacaacttggctacccattctaccatcatttatctcatacatgtattccctgagatcaagcacattccaaatccactgggaataggaatgattccaagaaatcaagtgagtcctgagcaggtggagagttatattgaccaagaaagaggcaagaggagagaggtccttcagaaatttctacaatcatgctctacttccaaggttaaggtagacaccatcctaattgagagtgacctagttgcaaaggctatcctggacctgattcccattcttcaaataagaaatctagtgattggagccaacaaattacatctaagaaaatcaaaatcaaggaaagggaatagcgtaggcgatcagatacttaagaaggctccacaaagttgcaaggtatcgcgtttccttgacaataatgctttcgtatga 618 0.0 MDKDGYRSSGICEIEEEEDSHETQWPIAIATNTINSEEQEDCVYVAVGKGKGKSDTSMDALSWTLNNLATHSTIIYLIHVFPEIKHIPNPLGIGMIPRNQVSPEQVESYIDQERGKRREVLQKFLQSCSTSKVKVDTILIESDLVAKAILDLIPILQIRNLVIGANKLHLRKSKSRKGNSVGDQILKKAPQSCKVSRFLDNNAFV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04479 205 Gene3D HUPs 37 198 IPR014729 -
Pste6g04479 205 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 7 196 - -
Pste6g04479 205 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 54 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04479 Pste-Chr6 34091475 34093555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04479 46 195 Plant U-box Gene Family AT5G57035 30.000 9.75e-12 61.6