Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04470 atgggtattgatgagagtcaacaatcattgctttcagaatcaagaaataattctcttcccaatgagaaaaaggacctccggaggagaaggactttggagaaagagaactacttccaaggacaaagtgttttccaaaagccgcctcaatgtatagatggaaaactacaagcagaatttcatttcaggttggtgttcttatggttagcattatatctaggtggaggaaccatttgcttccttctcacaagtcatcagatcaagggcataaaaaccaatggctttcttgatgccatttatttctgtgttgtaacaatgacaactgttggatatggagatcttgtgccagatagccaattggcaaaacttcttgcctgcgtttatgtcttcattggcatggcgcttgtagggttaattcttagcaaggcagcagattactttgttgacaagcaagaaatcttactagtttcaaccttattcaagggtgaacattttggtccagaagagctttccaaagaggttcaaactaacaaagctaaatacaaattcttgctggcaacatccatctttttggtgcttatggttgcaggaattatttttctgtattttgttgaaaatctagattttgttgatgccatctattgtgtttgttccacagtcactactttaggttatggggataagagtttctcaactgttattggtcgggcctttgctgtgttctggatattgagcagcaccatttgcttagctcagacttttgcttatcttgctgaatattatactgatgaaagacaaaaatcactgacaaaaatggttcttacgcggaagttgtcactctttgatcttgaggcagctgatctagatggagatcatgttgtcagcattttcttctccagtgctacagagttcgctttatacaagttgaaggaaatgggaaagatcaaccaagacgatattttagctgtgatggatatttttagaaaactagattttgatcaatcaggaaccctgacagaagctgatctcatatattctgaatga 1041 0.0 MGIDESQQSLLSESRNNSLPNEKKDLRRRRTLEKENYFQGQSVFQKPPQCIDGKLQAEFHFRLVFLWLALYLGGGTICFLLTSHQIKGIKTNGFLDAIYFCVVTMTTVGYGDLVPDSQLAKLLACVYVFIGMALVGLILSKAADYFVDKQEILLVSTLFKGEHFGPEELSKEVQTNKAKYKFLLATSIFLVLMVAGIIFLYFVENLDFVDAIYCVCSTVTTLGYGDKSFSTVIGRAFAVFWILSSTICLAQTFAYLAEYYTDERQKSLTKMVLTRKLSLFDLEAADLDGDHVVSIFFSSATEFALYKLKEMGKINQDDILAVMDIFRKLDFDQSGTLTEADLIYSE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04470 346 PRINTS Two pore domain K+ channel signature 103 131 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste6g04470 346 PRINTS Two pore domain K+ channel signature 220 229 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste6g04470 346 MobiDBLite consensus disorder prediction 1 26 - -
Pste6g04470 346 Pfam Ion channel 188 260 IPR013099 -
Pste6g04470 346 Pfam Ion channel 67 147 IPR013099 -
Pste6g04470 346 FunFam Calcium-activated outward-rectifying potassium channel 1 58 153 - -
Pste6g04470 346 MobiDBLite consensus disorder prediction 1 17 - -
Pste6g04470 346 SUPERFAMILY Voltage-gated potassium channels 176 276 - -
Pste6g04470 346 Gene3D - 166 279 - -
Pste6g04470 346 Gene3D - 45 155 - -
Pste6g04470 346 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Pste6g04470 346 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 62 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste6g04470 346 SUPERFAMILY Voltage-gated potassium channels 56 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04470 Pste-Chr6 33996568 34015198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04470 60 346 Ion Channels AT5G55630 56.098 3.82e-111 326