Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04467 atggaactccaactttccatcgtgaatattaccttatttctcttgctcttgttgctgccttggattgcaaggcagaaaatcaaagtgaggagtgtggttcgtaagcttcccccagggccatggaagttgcctctcatagggaaccttcatcaactggcatgggctgccacacttccacatctggttgtgtcatcccctgacatggccaaggagatcatgaagacatatgatcttaattttgtgcagaggccacaactcctttgttctcaaattctggtctatgggtcaaccgatattgccttcgctccatatggtgactactggagacagttgaggaaaatatgcacgctagagcttctcagtgccaaaagggttcactctttctccttcattcgtgactgggatgtagcctcagcaacaggaaagaaaagaataggtgagagtgatttagaggaccttaggtacttgaaagtggtgattaaggaaagcaagagactacatcctcctgttccattgttgctcccaagagaatgcagggaagcatgcaagataggtggatatgaaataggtatggagacaaaagtgattgtaaatgcatgggcacttgggagagatcccaagtattggtatgatgccgagaagtttatacctgagagatttgaaggcagagatattgagtttaaagggaataattttgagtacatcctctttgggccagggaggagaatgtgccctggcattttacttggcttagctaatgttgagcttcctctggctgcattgctctatcactttgactggaaactccccaatggaatcaaaccacaggactag 834 0.0 MELQLSIVNITLFLLLLLLPWIARQKIKVRSVVRKLPPGPWKLPLIGNLHQLAWAATLPHLVVSSPDMAKEIMKTYDLNFVQRPQLLCSQILVYGSTDIAFAPYGDYWRQLRKICTLELLSAKRVHSFSFIRDWDVASATGKKRIGESDLEDLRYLKVVIKESKRLHPPVPLLLPRECREACKIGGYEIGMETKVIVNAWALGRDPKYWYDAEKFIPERFEGRDIEFKGNNFEYILFGPGRRMCPGILLGLANVELPLAALLYHFDWKLPNGIKPQD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04467 277 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 237 246 IPR017972 GO:0005506|GO:0016705
Pste6g04467 277 Gene3D Cytochrome P450 29 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 Pfam Cytochrome P450 141 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 SUPERFAMILY Cytochrome P450 38 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PRINTS E-class P450 group I signature 68 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PRINTS E-class P450 group I signature 198 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PRINTS E-class P450 group I signature 234 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PRINTS E-class P450 group I signature 244 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PRINTS E-class P450 group I signature 157 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 Gene3D Cytochrome P450 137 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g04467 277 PANTHER OS08G0105600 PROTEIN 139 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04467 Pste-Chr6 33983742 33985013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04467 141 277 Cytochrome P450 AT3G26300 54.015 5.67e-46 159