Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04405 atgatgttgatgcaattaattatgtcagcacctgaaagtgagttgttgacatcgcacgatctgcttctgcaaagtgctttagagagtggaagctacaataaactccacagttacaaacacgttatcaatgggtttgctgtccacacaaccccttcccaggctgcaaagctaagaggtagggcaggagttaagttggtagagaaagacagaggagcgaaaatgatgacaacatacacaccccactttctaaatttagaagaaggaatatgggcacaagaaggaggagacagcaatgcaggtgatggaattgtgattggttttgtggacagtggcatcaacccacttcatcccagctttgcttacgatcccatgcaccctttcacatcaaatctctctctttttgagggtgcctgtcagcccggtcctctcttcccaccttgttcttgcaatggaaagatagttgcagccaggtacttctccgctggcgctcaagctgctgttacccttgatgcttccaaggattttctctctccctttgatgcagatggacatggcagtcatgtggcatctactgctgctggcaatgctggtgttcctgttgtggtcgatggcattctctatggaaaagctaccggaatggcaccacgtgccaggatttctgtttataaggctatctatccctccgtgggaactctagcagatgttgttgcagctattgatcaggagttttgttgtgcaagctgcagggaaccatggtcccacatcttcaagtgtagtttcattcagtccctgagtgtgggtgttgctgcttgcaacaccgacagaagctaccctcgttcacttttccttgcaaatggctatgtacttgatggcgtgggactatcaggaccaagtttgggaaatggatcaattttgcataagcttgtgctggctaaggatgcagtaaaaataaatggaacaggtcttacgactccagagtacatagaggagtgccagcatccagaagttttggaccctaacatagtgtttggaagtatcgttctatgcaccttctcagcgggcttctataatgcaacctcaactcttgctgctattgtgggcacatcaaaggctctaggattccagggttttatcttagttgcaaacccaagctatggtgattatattgcagagccagtcccatttgctgtttctggcattttgatcccccgagtagaagatgccaagtattatgaagaaaaaaccaagagggacaagaaaggaattgtcacagaatttggtgcattgggagctgtgggagaaggaagagttgccactttcacaggaagagcaccagtggttagtagattttcttcaaggggtccagatatcatcgacatcagcaaaagtccaactgatgtacttaaacctgatattcttgctccgggccaccaaatatgggctgcctggagccccatgagtgccttagaacctatgctcaaagggcagaattttgcattattatctggtaccagcatgtccacgcctcatgtggctggaatagcagcacttatcaagcaatacaatccgttatggactccatcgatgatagcatctgcaatctccacaacaagctcaaagtatgataatcttggagagcctataatggcagaaggcatggaggtcaacagcttacttccctccactccttttgactatggagcaggctttgtgaagcccaattgtgccatcgatccaggtttggtactatcatcagaatatgtagacttcatcagcttcttgtgttctttgccaaacacgagcaaggaagcaataattgcagctactggagagcaatgcgaacacccgtttgcttatccattcagtctaaaccttccttcagtaacaatatccgcactaagaggaacagtttctctgcgaagaactttcacgagtgtgggaacaacacagagacatacttggcatccgttctacctccaaatggaactaaagtctacctgtatccaacttggtttaccataa 2022 0.0 MMLMQLIMSAPESELLTSHDLLLQSALESGSYNKLHSYKHVINGFAVHTTPSQAAKLRGRAGVKLVEKDRGAKMMTTYTPHFLNLEEGIWAQEGGDSNAGDGIVIGFVDSGINPLHPSFAYDPMHPFTSNLSLFEGACQPGPLFPPCSCNGKIVAARYFSAGAQAAVTLDASKDFLSPFDADGHGSHVASTAAGNAGVPVVVDGILYGKATGMAPRARISVYKAIYPSVGTLADVVAAIDQEFCCASCREPWSHIFKCSFIQSLSVGVAACNTDRSYPRSLFLANGYVLDGVGLSGPSLGNGSILHKLVLAKDAVKINGTGLTTPEYIEECQHPEVLDPNIVFGSIVLCTFSAGFYNATSTLAAIVGTSKALGFQGFILVANPSYGDYIAEPVPFAVSGILIPRVEDAKYYEEKTKRDKKGIVTEFGALGAVGEGRVATFTGRAPVVSRFSSRGPDIIDISKSPTDVLKPDILAPGHQIWAAWSPMSALEPMLKGQNFALLSGTSMSTPHVAGIAALIKQYNPLWTPSMIASAISTTSSKYDNLGEPIMAEGMEVNSLLPSTPFDYGAGFVKPNCAIDPGLVLSSEYVDFISFLCSLPNTSKEAIIAATGEQCEHPFAYPFSLNLPSVTISALRGTVSLRRTFTSVGTTQRHTWHPFYLQMELKSTCIQLGLP 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04405 673 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Pste6g04405 673 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Pste6g04405 673 PRINTS Subtilisin serine protease family (S8) signature 502 518 IPR015500 -
Pste6g04405 673 SUPERFAMILY Subtilisin-like 14 604 IPR036852 GO:0004252|GO:0006508
Pste6g04405 673 Pfam Subtilase family 100 541 IPR000209 GO:0006508|GO:0008236
Pste6g04405 673 ProSiteProfiles Serine proteases, subtilase domain profile. 80 577 - -
Pste6g04405 673 ProSitePatterns Serine proteases, subtilase family, histidine active site. 184 194 IPR022398 -
Pste6g04405 673 Pfam Peptidase inhibitor I9 12 70 IPR010259 -
Pste6g04405 673 ProSitePatterns Serine proteases, subtilase family, serine active site. 503 513 IPR023828 -
Pste6g04405 673 Gene3D - 274 440 - -
Pste6g04405 673 Gene3D Peptidase S8/S53 domain 266 590 IPR036852 GO:0004252|GO:0006508
Pste6g04405 673 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 105 116 IPR023827 -
Pste6g04405 673 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 74 IPR037045 -
Pste6g04405 673 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 267 649 IPR045051 -
Pste6g04405 673 Gene3D Peptidase S8/S53 domain 102 241 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04405 Pste-Chr6 33368522 33375527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04405 19 646 Subtilisin-like Serine Gene Family AT1G62340 57.375 0.0 738