Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04365 atggctgacttgttggaatgggcaaagaaagataagcgccgcttgcttcatgtggtctaccgtgtcggtgaccttgaacgcaccatcaagttttatacagaatgtttaggaatgaagcttttgagacagagagatattccggaggagaaatacgccaatgcttttcttggatttggcccagaagaatcccattttgtggttgaattaacgtataattatggggtgacctcttatgacattggagatggctttggacatttcgctattgcaactctagatatttacaaattggttgagaacatccgggccaagggtggaaacgtcactagggagcctggtccagttcaaggtgggactactgttatcgcttttgtgaaggatcctgatggttacacttttggactcatccaaagaccaacagtccatgatccattttgtcaaataatgcttcgtgttggtgatttagagcgctcaattaagttttatgagaaggctttgggcatgaaggtggtgaggaaggttgataagcctgagtacaagtacacggtagttatgcttgggtatggagaggagcacgagacaactgtgttggagttgacatataactatgatgtcactgaatactctaagggaaatgcttatgcacagattgccattggtactgatgatgtatacaagagtgctgaggtagttgaccacgtcatacaagaggttggagggaagattactcggcaaccaggaccacttcccggccttaatacaaaaatcacttcctttttagatccagatggatggaaaacggtcttggttgacaatgctgatttcttggaggaactgaagtaa 843 0.0 MADLLEWAKKDKRRLLHVVYRVGDLERTIKFYTECLGMKLLRQRDIPEEKYANAFLGFGPEESHFVVELTYNYGVTSYDIGDGFGHFAIATLDIYKLVENIRAKGGNVTREPGPVQGGTTVIAFVKDPDGYTFGLIQRPTVHDPFCQIMLRVGDLERSIKFYEKALGMKVVRKVDKPEYKYTVVMLGYGEEHETTVLELTYNYDVTEYSKGNAYAQIAIGTDDVYKSAEVVDHVIQEVGGKITRQPGPLPGLNTKITSFLDPDGWKTVLVDNADFLEELK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04365 280 FunFam Lactoylglutathione lyase 141 280 - -
Pste6g04365 280 CDD GlxI_Ni 15 136 - -
Pste6g04365 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 272 IPR029068 -
Pste6g04365 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
Pste6g04365 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Pste6g04365 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 148 266 IPR004360 -
Pste6g04365 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Pste6g04365 280 NCBIfam lactoylglutathione lyase 14 138 IPR004361 GO:0004462|GO:0046872
Pste6g04365 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Pste6g04365 280 ProSitePatterns Glyoxalase I signature 1. 147 168 IPR018146 GO:0004462|GO:0046872
Pste6g04365 280 Gene3D - 141 280 IPR029068 -
Pste6g04365 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Pste6g04365 280 Gene3D - 1 138 IPR029068 -
Pste6g04365 280 PANTHER LACTOYLGLUTATHIONE LYASE 3 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04365 Pste-Chr6 32887452 32891138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04365 147 271 Calmodulin-binding Proteins AT1G08110 28.000 8.78e-10 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04365 6 32887452 32891138 Pste6g04365 6 32887452 32891138 ECH
Pste2g02554 2 25791389 25798078 Pste6g04365 6 32887452 32891138 ECH
Pste6g04365 6 32887452 32891138 Pste2g02554 2 25791389 25798078 PCT