Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04283 atgaagatggtgatggtatcagcggtgaagacaggggtggcgagtttgaaggtgggagaagtgagcatggagaaggtgagaagagagaggaagaaggaaaaggtagtggtaataatgggggcaacggggacggggaagtcaaagctggcgatagagttggcgacgcaattccgacaagcggagatagtcaactcagacaaaatgcaagtgtacgagggactggaaatcacaaccaacaaagtgagaaaggaagagtgtagaggggtccgacaccatctgctgggcacggtggatccaaaggccaatttcactgccaatgacttttgcaagcaggccactgtggcagttgagtccattttgaaaagggaagccctccccataattgcgggtgggtccaactccttcctggaagccctggtcaaccattaccctgacttttccatgcgctacacctgctgcttcctctggctccacgtctccctccccgtcctccattcctctctctccgcccgcgttgatcgcatgatccgctccggcctcctccacgaggttcaacagatcttccaataccacaaccgcgactattccctaggcattcgccgggccattggcgtccccgagtttcacgatttcttctcctccctttctgacaacgcccaccactccaccacccactccctcctccactctgccatttcttccctcaaactcaacaactgcaacctcgccaccaaacagctcctccacatcctccgcctctactccctctggcaacccaacatgcacctcctcgacgccaccgaggtcttccgacactcctcctctccccacctagctcacctttcctggcaccatcatgtcttctccaaaagcacctccattctccataacttcttctatgactatgatgactcccttcttccctctgttattgcttctccccctccgcccattgcctccgcaactcgctag 972 0.0 MKMVMVSAVKTGVASLKVGEVSMEKVRRERKKEKVVVIMGATGTGKSKLAIELATQFRQAEIVNSDKMQVYEGLEITTNKVRKEECRGVRHHLLGTVDPKANFTANDFCKQATVAVESILKREALPIIAGGSNSFLEALVNHYPDFSMRYTCCFLWLHVSLPVLHSSLSARVDRMIRSGLLHEVQQIFQYHNRDYSLGIRRAIGVPEFHDFFSSLSDNAHHSTTHSLLHSAISSLKLNNCNLATKQLLHILRLYSLWQPNMHLLDATEVFRHSSSPHLAHLSWHHHVFSKSTSILHNFFYDYDDSLLPSVIASPPPPIASATR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04283 323 Pfam IPP transferase 69 145 - -
Pste6g04283 323 Pfam IPP transferase 149 247 - -
Pste6g04283 323 FunFam Adenylate isopentenyltransferase 5, chloroplastic 161 261 - -
Pste6g04283 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 195 IPR027417 -
Pste6g04283 323 Gene3D - 32 298 IPR027417 -
Pste6g04283 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 261 - -
Pste6g04283 323 CDD NK 35 85 - -
Pste6g04283 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 32 298 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04283 Pste-Chr6 32033849 32038359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04283 149 299 C2H2 Transcription Factor Family AT2G27760 29.944 6.90e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04283 6 32033849 32038359 Pste2g02476 2 24974469 24975386 PCT