Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04268 atgcactggtattttcattgttccagtaagaaaggatttaaatccgattctaatgtactggagtcatctgtcgatgtagacttctttactgaatatggcgaagggagtagatacagaatagaggaagtaattggtaaaggaagctacggtgttgtttgttctgcatatgatacacacactggagaaaaggttgcaataaagaaaatcaatgacatatttgaacatgtttctgacgccactcgcattcttcgtgagatcaagcttcttagactcttacgccatcctgatattgtggagatcaagcatatcttgttacctccttctagaagagaattcaaagatatatatgttgtttttgaacttatggagtctgatttacatcaggtcatcaaagcaaatgatgatctgactccagagcattatcagttttttctctatcagcttcttcgaggattgaagtatatacacacagcaaatgtttttcaccgagatctaaagccaaaaaatattttagcaaatgctgactgcaaactgaagatttgtgactttggtcttgccagagttgctttcaatgatacaccaactgctatattttggacagattacgttgcaacaaggtggtatagagctcctgaattgtgtggatcctttttctccaagtataccccagctatcgacatatggagcattggctgcatttttgcagaacttttaactgggaaacctcttttcccggggaagaatgttgtccaccaattggacctcatgactgattttcttggaactccgtctcctgaagccattgctagggtacggaatgagaaagctcggagatacttgagtagcatgcgtaagaagaagccagttcctttcgcccaaaggtttcctaatgtagatccccttgctcttcgtgtgttagaaagaatgctggcatttgaacctaaggatcggcctactgctgaggaggctctagcagatccatattttaaaggcttggccaaggttgagagagagccttctgctcagcctgttaccaagatggaatttgaatttgagagacgtaggataacaaaggaagatgtgcgagagcttatataccgagagattctggagtaccatccaaagatgttaaaagaacatctggagggagcagagccaacaggattcatgtatccgagtgctgtggaccacttcaagaagcaatttgcatatctcgaggagcattatggaaaaggtggaactgttactccacccgagaggcaacatgcatcattacccaggccatgtgtgttgtattcagataagtcaagacaaaatatggctgaggttgcagatgatatctccaagtgtagcatgaaagaagttgagaatctagtcatagacaggactggtggtattccaatgaccaggcttcctctaaaagctcccaaagtattcaagtgcattgcaggcattgtcttgagagtgttgtgctcattgttgaggcttttcactttcatcgttctttcaacccatgagaagtatgtttctggcgctgctgcaaggcctggaaaagttctaggttcagtattgcgttacaacaattgtaaggtagcagtgacagctgaggctgagaagcggaggatgggtagaaatccgtctgtttcagctcaaagagggattgaaggtgctaatggacttcagacaaagcctcaatacgtagcacgcaaagttgctgctgctcaaggtggacctggtggtaattggtattga 1752 0.0 MHWYFHCSSKKGFKSDSNVLESSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFAQRFPNVDPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDKSRQNMAEVADDISKCSMKEVENLVIDRTGGIPMTRLPLKAPKVFKCIAGIVLRVLCSLLRLFTFIVLSTHEKYVSGAAARPGKVLGSVLRYNNCKVAVTAEAEKRRMGRNPSVSAQRGIEGANGLQTKPQYVARKVAAAQGGPGGNWY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04268 583 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Pste6g04268 583 SUPERFAMILY Protein kinase-like (PK-like) 35 333 IPR011009 -
Pste6g04268 583 ProSiteProfiles Protein kinase domain profile. 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04268 583 SMART serkin_6 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04268 583 FunFam Mitogen-activated protein kinase 124 352 - -
Pste6g04268 583 Pfam Protein kinase domain 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04268 583 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 353 - -
Pste6g04268 583 CDD STKc_TDY_MAPK 37 374 - -
Pste6g04268 583 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pste6g04268 583 FunFam Mitogen-activated protein kinase 28 132 - -
Pste6g04268 583 Gene3D Phosphorylase Kinase; domain 1 53 374 - -
Pste6g04268 583 Gene3D Transferase(Phosphotransferase) domain 1 124 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04268 Pste-Chr6 31886170 31890952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04268 21 583 MAP Kinase Gene Family AT5G19010 74.703 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pste6g04268 Pkinase 4.1e-67 CL0016