Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04251 atggcctcctcacccccagccttggatcctccatcggcactgcccctgaccctgtggtactccctcggccgcggcaacctcaaggccacccactggcaagaggtcgccgacgccgttgcccatcgctgccccaacgcctcccctcccaagacccccgtccagtgccgccacaaaatggagaagctccgcaagcgctaccgcaccgagatccaacgcgctcgctccctccccgtttcccgtttcaactcttcctgggtccacttcaagctcatggactccatggagaaaggcccttcccctgttaagccccctcacgattccgatagcgacaatgataacgacgacgacgacgacgatcaagatctctaccaggacatcaaccacaacggccacaccaggagtttgaacaagttgtataggaatggctttcccccttccgcttccgcttccgcttccgcctccgcctccgcctccgcctccgcctccgctcctggtttcagaattcgaatccccaccgctcctcagcccggatctgcctccaagctctttgggaatcacaaattcaaccccacttttaatcaaaaccctaacccttcttttgggaagaagagggagcgagaaagggaccccgtcggtgacgtcgttgctgccattaagcttttgggagatgggtttgtcaggatggagcagatgaagatggagatggccagggagattgagaccatgaggatggagatggaaatgaagcgcactgaaatgattcttgactcgcaacagcggattgtcgaggcctttgccaaggccgtttccgaaaacaagaataaacccaagactgcctcctcgccccaacatccttaa 858 0.0 MASSPPALDPPSALPLTLWYSLGRGNLKATHWQEVADAVAHRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPPHDSDSDNDNDDDDDDQDLYQDINHNGHTRSLNKLYRNGFPPSASASASASASASASASAPGFRIRIPTAPQPGSASKLFGNHKFNPTFNQNPNPSFGKKRERERDPVGDVVAAIKLLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILDSQQRIVEAFAKAVSENKNKPKTASSPQHP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04251 285 SMART 118neu2 18 99 IPR006578 -
Pste6g04251 285 MobiDBLite consensus disorder prediction 94 139 - -
Pste6g04251 285 Pfam Myb/SANT-like DNA-binding domain 24 94 IPR044822 -
Pste6g04251 285 MobiDBLite consensus disorder prediction 178 199 - -
Pste6g04251 285 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 19 271 IPR044823 -
Pste6g04251 285 MobiDBLite consensus disorder prediction 167 208 - -
Pste6g04251 285 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04251 Pste-Chr6 31742452 31743875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04251 19 94 Trihelix Transcription Factor Family AT3G14180 35.526 1.84e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste6g04251 Myb_DNA-bind_4 7e-14 CL0123