Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04236 atgggttgtgtccatggcaagtgttgctgtagtgaccgttcccaatcggaggatggttctagggattaccgagaatttggcctctttcattgccacaagaagaacatacttgctcagaaatcattgaagcacgttcctgttccttctcacaacttcattttggaatacacttttctcactcagcgggggtactaccccgactcacctgctaaagaaaaccaggatagtttctgcattactactcaaatccaaggtaaccccaatgcccatttctttgctgtctatgatggccacggtcaatttggtacccagtgttcaaatttcgttaaggataggttggtagacaagttgtcaaatgatcctaccttattggaccaccctgttcaagcttacaattctgcattcttggcaaccaatcaagaattgcatactgctactgagattgatgattctatgagtggaactactgcaattacagtgcttgttattggtgacaccctttatgttgctaatgttggtgattcaagagcggtgctggctgtaaaggacggaaaccggattgttgctgaggacttgtcctctgatcagaccccgtttcgaagagatgagtatgagagagtcaaactttgtggagcaagggtgttgagtgttgatcaggtggaagggctcaaggatccagatatccagaattggggtgatgaagagagtcggggtggggatcctccgagattgtgggttcctaatgggatgtatcctggaactgcatttacaaggagtataggggatagtttggcggagactattggtgtcattgcttgtcctgaggtgaaaacagttcagcttacacctaatcatcttttctttgttgtggcaagtgatggcatatttgaattcctgacaagccaaaccgttgttgatatggcagcaagctatatggattctcgtgatgcttgtgcagctattgcagaaaaatcatataaactatggttggaacttgagaacagaacagatgatataacaattatcattgttcagatcaaagtcaggtacatccgggttggatcagatgagatcaatgttggtactgtaatgagttccaggacaggaactcctgagatatctgctacacctggatctgatgtttatcgttctgtcagaactagtttctctgatttgcactcctgtcagcatgtggcttcagtgacgagcctagccatagaggttcactctccaaccaagaccaattga 1248 0.0 MGCVHGKCCCSDRSQSEDGSRDYREFGLFHCHKKNILAQKSLKHVPVPSHNFILEYTFLTQRGYYPDSPAKENQDSFCITTQIQGNPNAHFFAVYDGHGQFGTQCSNFVKDRLVDKLSNDPTLLDHPVQAYNSAFLATNQELHTATEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVIACPEVKTVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDSRDACAAIAEKSYKLWLELENRTDDITIIIVQIKVRYIRVGSDEINVGTVMSSRTGTPEISATPGSDVYRSVRTSFSDLHSCQHVASVTSLAIEVHSPTKTN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04236 415 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 348 - -
Pste6g04236 415 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Pste6g04236 415 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Pste6g04236 415 Gene3D - 54 348 IPR036457 -
Pste6g04236 415 PANTHER PROTEIN PHOSPHATASE 73 345 IPR015655 GO:0004722|GO:0006470
Pste6g04236 415 CDD PP2Cc 71 346 IPR001932 -
Pste6g04236 415 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Pste6g04236 415 Pfam Protein phosphatase 2C 84 324 IPR001932 -
Pste6g04236 415 SMART PP2C_4 51 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04236 Pste-Chr6 31573802 31576656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04236 1 347 PP2C-type Phosphatase Gene Family AT3G06270 69.714 4.05e-174 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04236 6 31573802 31576656 Pste6g04236 6 31573802 31576656 ECH
Pste6g04236 6 31573802 31576656 Pste2g02436 2 24537578 24541269 PCT