Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04204 atggctgttggagcattctaccataaactaagcacagtcttcacctctgatcatgcttccgtggtctcaatgaacctttttgttgctcttctatgcgcttgcatcatcatcggtcatctgttggaggagaaccgatggatcaatgaatccatcactgcccttctcatcggtctctgtactggggtctttatattgttcactaccggaggaaaaagctctcatatactagtcttcagtgaagatcttttcttcatttaccttcttccacccatcattttcaatgctgggtttcaggtgaagaagaaacaatttttcctcaattttatgactataatgctctttggtgctattggtactttgatatcattctgcatcatatcactaggtgctatacacttttttcagaaattggacattggttccctcaagattggagattttctagcaattggagcaatattctcagcaacagattctgtttgcacgttgcaggttcttaatcaggatgagactcctttactctatagcctggtctttggggagggggtagtaaatgatgctacctccgtggttctcttcaaagcaattcagaattttgatctctctcacattgacttaaccactgccttacagttaataggaaattttttatatttattcattgcaagcactgtgctgggagtctttgctggactgcttagtgcatacattattaagaagctctattttggaaagcttataaggcattctacagatcgtgaggttgctctcatggtactcatggcatacctttcatatatgctagctgaactattttctctaagtgccattctaactgttttcttctgcggcattgttatgtctcactacacgtggcataatgtgacagaaagttcaagagtgacaaccaagcatgtttttgccactttgtcattcattgctgaaatctttatcttcctgtatgtggggatggatgcattagatatagaaaagtggcgaattgtaagtcaaagcccacgaaaatcaattggggtcagttcattgctgttggcacttatcttagtgggaagagctgcatttgtttttcctttgtccttcttatcgaacttgcttaagaagtctcaatctgagaagattgagttaaagcaacaagtaacaatttggtgggctggtctcatgcgtggagctgtttctatcgctcttgcctacaatcagtttaccaggctgggccatactaaactgcgcgagaatgccatcatgatcactagtaccatcactgttgtactcttcagcacattggcgtttgggttgatgacaaagccacttgtgagactattgcttccttcctctagacacgtaatgagcttgccgtccccaccatcgacaccaaaatcactcactgtgccacttcttggcagtggagaagattcatcatgggccaatggtggcacccaaaatgggcctccaccaagcaccttgaggatgctcctaagttgcattcctaatcgtggggtacaccactattggcgcaagtttgataattctgtcatgcgacccgtctttggtggacgaggttttgtgccctacgttcctgggtcaccccttgaacaaagtgttcatcagtggcactgcagttag 1638 0.0 MAVGAFYHKLSTVFTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIGLCTGVFILFTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFLNFMTIMLFGAIGTLISFCIISLGAIHFFQKLDIGSLKIGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALQLIGNFLYLFIASTVLGVFAGLLSAYIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPSSRHVMSLPSPPSTPKSLTVPLLGSGEDSSWANGGTQNGPPPSTLRMLLSCIPNRGVHHYWRKFDNSVMRPVFGGRGFVPYVPGSPLEQSVHQWHCS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04204 545 Pfam Sodium/hydrogen exchanger family 27 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pste6g04204 545 Gene3D - 143 195 - -
Pste6g04204 545 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pste6g04204 545 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pste6g04204 545 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pste6g04204 545 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pste6g04204 545 Coils Coil 364 384 - -
Pste6g04204 545 PANTHER SODIUM/HYDROGEN EXCHANGER 16 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04204 Pste-Chr6 31267870 31282911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04204 9 541 Antiporters AT3G05030 74.674 0.0 805
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04204 6 31267870 31282911 Pste6g04204 6 31267870 31282911 ECH