Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04199 atgggttgtgtgtttgggaaagaagcatcaaagaggaaagaggaagtggaagatgcaagaacagaagaggttgtggttcagaacggtggagaggaggagaagaggaagcgagcaaaggggcagaagaggcgaacttcgaagccaaatccaaggttgagcaatccacctaacaatatacatggtgaacaagtagctgcaggctggccctcttggctctccaaggttgcaggggaagctatcaatggattgattcctagaagagctgacacttttgagaagcttaataagattggacaaggtacatatagcaatgtttacaaagcaaaggatactttgacagggaaaattgttgccctaaagaaggttcgctttgacaatttagagccagagagtgtgaaattcatggccagagagattcttattctgcgccatctggatcatcccaatgttgtcaaactggaaggtttagtgacttccaggatgtcatgcagtttgtaccttgtttttgaatacatggatcatgatttggctggacttgctacaagccccacaatcaagttcactgagtctcaggttaaatgttacatgcatcagctactttctggattggaacactgtcacaaccgtcatgtgctgcatcgtgatataaaggggtcaaaccttcttattgacagtgagggaattcttaggattgctgattttggattagcttccttctttgatcctaatcacaagcaccctatgacaagcagggtggttactttatggtatcgaccaccagaacttctccttggagccactgattatggtgtaggagtggacctctggagtgctggctgcattcttgctgaattgttggctggcaagcctattatgcctggtcgaactgaggtggagcaactacataagatatttaagctttgtggttctccttccgatgaatattggaaaaaatcaaagttgcctcatgctaccatttttaagccccgacaatcatacaagcggtgcatagcagagacatttaagaatttcccagcatcgtctctgccactaattgagactcttctcgcaatcgatccagctgaacgtcaaactgccacagatgcattgcatagtgaattttttacaacaaaaccttatgcctgtgaaccctctagccttccaaaatatcctcccagcaaggagatggatacaaaactacgggatgaagaagctagaagattgagagctgctggcaaagctaatgctgctggcgtcaagaaatcacgtccacgtgatcgaagcagaaggggaattccagttccagattccaacgctgagttgcaagcaaatattgatagatggcgactggtaacacatgcaaatgctaagagcaaaagtgagaagtttcctcctcctcatgaagatggagctctaggctaccctttgggttcttcccatctcatggatccaattttcgatcctcctgatgttccatttagttccacaaacttgacgtatcctaaagcgaatttccagacctggtctggcccattgatggaacctagtgtggatgctccaaggagaaagaagaacatgccagggaatgggcacacacaatcaaagaaggactcttatagatag 1623 0.0 MGCVFGKEASKRKEEVEDARTEEVVVQNGGEEEKRKRAKGQKRRTSKPNPRLSNPPNNIHGEQVAAGWPSWLSKVAGEAINGLIPRRADTFEKLNKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHLDHPNVVKLEGLVTSRMSCSLYLVFEYMDHDLAGLATSPTIKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDSEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPRQSYKRCIAETFKNFPASSLPLIETLLAIDPAERQTATDALHSEFFTTKPYACEPSSLPKYPPSKEMDTKLRDEEARRLRAAGKANAAGVKKSRPRDRSRRGIPVPDSNAELQANIDRWRLVTHANAKSKSEKFPPPHEDGALGYPLGSSHLMDPIFDPPDVPFSSTNLTYPKANFQTWSGPLMEPSVDAPRRKKNMPGNGHTQSKKDSYR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04199 540 MobiDBLite consensus disorder prediction 502 540 - -
Pste6g04199 540 SMART serkin_6 91 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04199 540 ProSiteProfiles Protein kinase domain profile. 91 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04199 540 MobiDBLite consensus disorder prediction 409 440 - -
Pste6g04199 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Pste6g04199 540 FunFam probable serine/threonine-protein kinase At1g54610 78 173 - -
Pste6g04199 540 Pfam Protein kinase domain 91 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04199 540 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
Pste6g04199 540 FunFam probable serine/threonine-protein kinase At1g54610 174 415 - -
Pste6g04199 540 CDD STKc_CDK9_like 91 375 - -
Pste6g04199 540 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Pste6g04199 540 MobiDBLite consensus disorder prediction 7 38 - -
Pste6g04199 540 Gene3D Transferase(Phosphotransferase) domain 1 174 414 - -
Pste6g04199 540 PANTHER CELL DIVISION PROTEIN KINASE 89 379 - -
Pste6g04199 540 SUPERFAMILY Protein kinase-like (PK-like) 86 380 IPR011009 -
Pste6g04199 540 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04199 Pste-Chr6 31216975 31223630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04199 86 413 Core Cell Cycle Gene Families AT5G10270 52.616 1.38e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste6g04199 Pkinase 1.9e-68 CL0016