Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04182 atgcagagtcgagctcggatgaggacgagctataagttgccgttgggtgcccaatatattctcaggcaggatcaggacgttcaatgtgcgttaaaagactctcttcagattgacatgatccaaggcaaggcagttgaattggaatatgtggagcatgggagagagcttgcaaatgctacaaagcagtttaggaacgatcggttgttgggtcgaggggggtttgggcacgtgtacagaggtcgacttaaggaccgacaagaagttgctgtgaaaatgctagaccaaaatagccaacaaggagacgatgaatttaggcaggaggtaaacatgctgtcccggttacgtcacacaaacctggtgacattgattggatacagctcggaacgtgatcagaggctacttgtatacgaatacatggcattgggatcattggatcgtcatatatgggacgttccagaagggaggagaccccttgagtggaacacaaggataagaatagcacaaggtgtggcacatggattggagtatttgcatggcctgcaagaccagccagtaatattcagagacttcaaagcagccaacatcctcctggacagtgattataatcccaagttgtcggattttgggttggcaagagttggcccagtaggagataagactcacgtatccactagagtggtgggaacacacggttattgtgcaccagagtacggcgtgactggccacctaactcccaaatgtgatgtgtacagtttcggagtggtgctgctggagcttattacggggcggaaggtcattgataagacacgtcaaccggagcagcggaatcttgtaatgtgggcacaagctcgttttggggagcgtaagcaggatgatggatttgaagtagcatttgcagacccaaggctggaggggcgttatccaaagaaaggactacacgatgcagtgggtatagcagaaatgtgcttgaaggaagatgcaagtgcaaggcctgatatggcgcatgtggttattgctcttcagtacgttgagggagtggcagatgcagatgcttatgcttatgcttatgcttatgcttatgctggaccaggaccctcctcatcatcttcatctcccatgccacccaaccctcaacaggacagacgacgtgccctcgatgaagctagaagacaaaagcgacctgctgcctccccttcatccttcattccctaa 1212 0.0 MQSRARMRTSYKLPLGAQYILRQDQDVQCALKDSLQIDMIQGKAVELEYVEHGRELANATKQFRNDRLLGRGGFGHVYRGRLKDRQEVAVKMLDQNSQQGDDEFRQEVNMLSRLRHTNLVTLIGYSSERDQRLLVYEYMALGSLDRHIWDVPEGRRPLEWNTRIRIAQGVAHGLEYLHGLQDQPVIFRDFKAANILLDSDYNPKLSDFGLARVGPVGDKTHVSTRVVGTHGYCAPEYGVTGHLTPKCDVYSFGVVLLELITGRKVIDKTRQPEQRNLVMWAQARFGERKQDDGFEVAFADPRLEGRYPKKGLHDAVGIAEMCLKEDASARPDMAHVVIALQYVEGVADADAYAYAYAYAYAGPGPSSSSSSPMPPNPQQDRRRALDEARRQKRPAASPSSFIP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04182 403 MobiDBLite consensus disorder prediction 363 377 - -
Pste6g04182 403 Pfam Protein kinase domain 64 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04182 403 FunFam Serine/threonine-protein kinase PBS1 139 355 - -
Pste6g04182 403 Gene3D Phosphorylase Kinase; domain 1 23 138 - -
Pste6g04182 403 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 40 138 - -
Pste6g04182 403 CDD STKc_IRAK 69 337 - -
Pste6g04182 403 MobiDBLite consensus disorder prediction 363 403 - -
Pste6g04182 403 PANTHER OS07G0668900 PROTEIN 54 345 - -
Pste6g04182 403 Gene3D Transferase(Phosphotransferase) domain 1 139 354 - -
Pste6g04182 403 SUPERFAMILY Protein kinase-like (PK-like) 52 338 IPR011009 -
Pste6g04182 403 ProSiteProfiles Protein kinase domain profile. 63 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g04182 403 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04182 Pste-Chr6 31101665 31103656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04182 54 388 Glycoside Hydrolase AT3G07070 55.952 2.46e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste6g04182 Pkinase 3.3e-47 CL0016