Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04134 atgcttagttctgaaagagaacttaaaataagttttggctataaatgcaatagcaatagaggtatcccttgtgaagttgccagtggctgcaaaatccttcctggagtacgtagaacaagcagtttttcttgcttgtcaggtgcagccttaagtgctaatgctacattagcgaacacaaacatctgcaatggtaaaataggagaagaaatccttccaagttgggactctcctaattcatttcggaaggtaacctcttcaccaagtctttcaaagttggacatactatcatcttccctcccgaatagtttgtcttaccttagctgcagtccttctactacaagtgatatccttgaatatgactcttgcacattaaaatccttgagtgatccttccagaagtgagggatttcttaatactagggaagttcaagtagcaggaggagcagctggtgaagatagagttcaagcagtttgttctgaagaaaatgggtggctcttctgtgcaatttatgatggctttaatggaagagatgcagctgactttctagctggtaccctgtatgacaccatcatatcttactttaataagttaatttgggaattggagccaggttccatcaaagcttatgatgatggatgcttgggtagaaccctgcaatataagttggatgatagtcttaattatcatgaggatcaatctctgtcaagatttatgggaataaatgattctagtcatggttgttttgcaaagtatagtccatctacgaagttagaaacattgtttgattcattttcacatggggtacttgatatgctcgaacgtgctcttagtcaggctgagaatgatttcttgtacatggttgagcaggaaatggaggaacgtcctgatttagtttctataggatcttgtgttttactagtgcttcttcatggtaatgatttgtatacacttaatctaggtgacagcagagcagtactggcaacatgcagtacaggtgagcgaatggataagagtgagagattaaaggctatacaacttacagataatcatactgttgataatgaagttgaaagagctagacttctggctgatcatcctgatgatccgaagatcattatggcaggaaaagtaaaagggaaactgaaggttacacgcgcatttggggttggctacttgaagaagaaaaatctgaatgatgctttgatgggaatccttcgagttcgcgatcttaaaagcccaccatacatatccactcagccatcactgaatgtccatcaaatctcaaatttggatcaatttgttatagtagggagtgatggtttatttgacttcttcagcaacgatgaagcagtaaagcttgtagagtcttatatcttgaacaatcctttgggtgatccagcaaagtttctcatagagcggcttgtagctagagcagctgattctgcgggtctcagcaaggaagagttgatgaatattccagcggggaggagaaggaagtaccatgatgatgttaccgtaattgtgatcatgcttgggatgaatcagcggacttcaaaggcatcaacttgcatttaa 1575 0.0 MLSSERELKISFGYKCNSNRGIPCEVASGCKILPGVRRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPNSLSYLSCSPSTTSDILEYDSCTLKSLSDPSRSEGFLNTREVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIWELEPGSIKAYDDGCLGRTLQYKLDDSLNYHEDQSLSRFMGINDSSHGCFAKYSPSTKLETLFDSFSHGVLDMLERALSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCSTGERMDKSERLKAIQLTDNHTVDNEVERARLLADHPDDPKIIMAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYISTQPSLNVHQISNLDQFVIVGSDGLFDFFSNDEAVKLVESYILNNPLGDPAKFLIERLVARAADSAGLSKEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04134 524 Pfam Protein phosphatase 2C 226 466 IPR001932 -
Pste6g04134 524 Gene3D - 106 520 IPR036457 -
Pste6g04134 524 SMART PP2C_4 130 509 IPR001932 -
Pste6g04134 524 SUPERFAMILY PP2C-like 150 512 IPR036457 -
Pste6g04134 524 ProSiteProfiles PPM-type phosphatase domain profile. 136 511 IPR001932 -
Pste6g04134 524 PANTHER PROTEIN PHOSPHATASE 2C 142 509 IPR015655 GO:0004722|GO:0006470
Pste6g04134 524 FunFam Probable protein phosphatase 2C 40 117 520 - -
Pste6g04134 524 CDD PP2Cc 149 509 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04134 Pste-Chr6 30641529 30644972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04134 7 524 PP2C-type Phosphatase Gene Family AT3G16560 62.214 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04134 6 30641529 30644972 Pste2g03189 2 31763942 31766693 PCT