Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04116 atggaggagcctcagtaccgcgaacatcccaaaaccaaaatcgccaccattccgccgccgcagcactcagacgcctctgccgccgagttgcgcagtgtcgattgtaacctcgcttccctctgcgagcatgtccaaatcgaaggcttcaattccggttccttctccgatatcgtcgtcaatgccatgggttccacttatcacctccaccgtcttattctttcccggagttcgtatttcaggaacatgcttcatgggccttggaaagaagccggtgctcctgttgtaactctgcttgttgatgataagaatgttaatgatgaggcaattgcaatggctttggcatatctatacggacaccaccctaagcttaatgataataacgcatttcgtgttcttgctgctgcttcctttcttgaccttcaggatttatgtggaatttgtacggatttcattatatctgaactgtggacttcaaacttcttggcttatcaggtctttgcggagaaccaagactacggcattcatggggagcgtgttagaactgcttgctggggatatctctgtcaaagtggtggcatggaattgaaagaggtgcttcctaaactttcatctcaaacattacatgcattactgacttctaatgatctgtggatacccaatgaagagaaacggtttgaattggctttgcacacattcctagcaaaaagttcccattgcaaggttgaacatcccacacatggaatttctggttcggggtcttcaaccagtattcatgctgattctggtagcagtaagggaaaaagtgtaactgatagctgcatttgtaagaggttggaaactgacatggggaaaatgagtgttaaaagtgatttaaaggaccctagcactcctaatcttctagttgagcttgtagatccagtggcagactgcaatgatggggtttctgtttccaatgaacagattcaacaagcttcatatgtcagttcaccaaacctgaatccaagatattcctgtgacatggaaggaccatcattaggtaattcattgcctgatacagatggaatgagaacatcttgttatgttgagatgcctcttggtgctggagccactggagtgggtgttgaagggccatctgaagaagggccttgctactatttggagaacaatagtaggttagttagggatcaatcaagacattgcttttcatcaaattcttgtaatgagattacatccagtgattggggaaggcacggaacacccatattttcatggaatggccaagttgttggcagaagacagcttaaagctcaccccaaaggaaactacagatgtcatggagatgaacatgattcatttttcaatatatttgaagggggttcccttttatattgcaatatgtcttttgatgcacttctaagtgtcagaaagcaccttgaagaattgggtttcccttgcaaagctgtaaacgacggtctttggctgcagatgcttcttagtcagagggtacaggaaattgcagctgatacatgcaaagtgtgctccctcttgagtatggcttgcacttgtcagaagcaatttacattttcacatggagcttctaccactggatcttatgtgcaagaacataatcagaacattatgcctggcaacatgggaaatatatatgttgctgaatcttctgttggcgaaagaaatggttctttaagacatgtgcgagtacgtgttagaggtgctattgatgggcttgcaggtattggccgtggaactacttttgttcctgcatctgcttcgcctcctactcgttttgtcttctctcgtgtaccatttagtgttggcaacagaaactatcctcagtctgcagccaatgatgattcggagacacgtgctgaccccaatggagacctgtctggagatggattgacagctttagttgggctaagcatgggagggagtaatggaccagatgcacctacagagttaacacaaaggggatatgaattgggcttgcaaagcagcatatctggaactactgttggaggtgcaagtaccggtggcattcccatgcagatgttagagacaccggaacacaccattggtatagaatgggacaatgtcaacagtacttctatatctctggatctgaaaacacctttaagccattttccccctttccgctttggtgtacgttttgaggatgtgcatagacttggtgatggccaagtcaagcattccccagaagttttctatgctggttctttgtggaaggtcagcgtacaagcttttaatgatgaagacccccaagggcggcaaacccttggattgtttcttcaccgccggaaggcagagataactgatatacatagaaaggtgcatatgtatgttgattcgcgagaaaaggtgactgctcggtaccagttgactgtcccatccaagagggaaatgatggtgtttggaagctttaaacaaacaggcactcttctacccaaagctcctaagggttggggttggcgaactgctctgctatttgatgaacttgctgatcttcttcaaaacggtgctctaagggtcattgctgtagtgcagcttgtttaa 2592 0.0 MEEPQYREHPKTKIATIPPPQHSDASAAELRSVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEAGAPVVTLLVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKSSHCKVEHPTHGISGSGSSTSIHADSGSSKGKSVTDSCICKRLETDMGKMSVKSDLKDPSTPNLLVELVDPVADCNDGVSVSNEQIQQASYVSSPNLNPRYSCDMEGPSLGNSLPDTDGMRTSCYVEMPLGAGATGVGVEGPSEEGPCYYLENNSRLVRDQSRHCFSSNSCNEITSSDWGRHGTPIFSWNGQVVGRRQLKAHPKGNYRCHGDEHDSFFNIFEGGSLLYCNMSFDALLSVRKHLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLLSMACTCQKQFTFSHGASTTGSYVQEHNQNIMPGNMGNIYVAESSVGERNGSLRHVRVRVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFSVGNRNYPQSAANDDSETRADPNGDLSGDGLTALVGLSMGGSNGPDAPTELTQRGYELGLQSSISGTTVGGASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRQTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04116 863 MobiDBLite consensus disorder prediction 615 638 - -
Pste6g04116 863 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
Pste6g04116 863 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 15 863 - -
Pste6g04116 863 MobiDBLite consensus disorder prediction 247 269 - -
Pste6g04116 863 SUPERFAMILY POZ domain 49 153 IPR011333 -
Pste6g04116 863 Gene3D Potassium Channel Kv1.1; Chain A 25 188 IPR011333 -
Pste6g04116 863 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Pste6g04116 863 MobiDBLite consensus disorder prediction 244 269 - -
Pste6g04116 863 SMART BTB_4 55 155 IPR000210 GO:0005515
Pste6g04116 863 MobiDBLite consensus disorder prediction 1 25 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste6g04116 BTB 2.9e-13 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04116 6 30489036 30495195 Pste6g04116 6 30489036 30495195 ECH