Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04080 atgaattccaacacgcacaaatcctcctccgtttccctcaacaacttcaatttcgatttcgatctcggcatcagcaacggatccaaccgtcccaaatccctaaacgatcagaaaaaccccaaaccttcctatccctattcctattcttcttcctctgctcaacccaatagacaaccctcatggacccaccaaccagctcctactcagcccaccgctttccccggtggccccccctccatggtcggagacatcttcggcaagagttgggctacccctcaaccgtcttcctcttccaataacattggcgtcgttaataaaaacccaaatcttttcggtgatctcgtttcttctgctctatcccagggttccaagaccacttcttccaatgttcctctcaaaaatgttccttccaataataaaacctctttctctatgggagcaatggccgattctttgcccaaaaccggatccacccctcgcaccactgctcctcgccctgccaacaattttggggctccttcaatgcgaaacatcgctaccaatagacaggatccctttagttctttgtctggtattggatccaagcaatctgctactcttaattcggcccctaaaccacaaaagcctgatttaggggacgatggttttggagattttcaaaatgccaccaaaccgaccccgcccgcgtttccatctcctggaattgatatcaattttagtggatctactgctgctgctgctcagggatcaagtggcgatgatccaatggacatgtttttcacatcagcttcctcggcctcggatgcagttggaggacaggatgattggggtttggattctgagtttggtgggggtggcaccaccactgagcttgaggggttgcctcctcctcctgctggggtctcaggttccaccgccaaagtcaaggggatggacagttacaaacagggccagtttgctgatgctatcaagtggctttcttgggccgtcctccttctagagaaagccatggatagtgctgccacactcgagcttttgtcatgcagggcttcctgttacaaagaagttggggagtataaaaaggcagtggcagattgtacaaaggttcttgaaaatgatgaaaccaatgtagctgtcctggtgcaacgtgctctcttgtatgagagtatggaaaagtacaaacttggtgcggaagaccttaggactgtgctgaagattgatcctggtaacaggattgctagaagcaccgttcaccggttggctaagatggctgattag 1278 0.0 MNSNTHKSSSVSLNNFNFDFDLGISNGSNRPKSLNDQKNPKPSYPYSYSSSSAQPNRQPSWTHQPAPTQPTAFPGGPPSMVGDIFGKSWATPQPSSSSNNIGVVNKNPNLFGDLVSSALSQGSKTTSSNVPLKNVPSNNKTSFSMGAMADSLPKTGSTPRTTAPRPANNFGAPSMRNIATNRQDPFSSLSGIGSKQSATLNSAPKPQKPDLGDDGFGDFQNATKPTPPAFPSPGIDINFSGSTAAAAQGSSGDDPMDMFFTSASSASDAVGGQDDWGLDSEFGGGGTTTELEGLPPPPAGVSGSTAKVKGMDSYKQGQFADAIKWLSWAVLLLEKAMDSAATLELLSCRASCYKEVGEYKKAVADCTKVLENDETNVAVLVQRALLYESMEKYKLGAEDLRTVLKIDPGNRIARSTVHRLAKMAD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04080 425 SUPERFAMILY TPR-like 307 415 IPR011990 GO:0005515
Pste6g04080 425 MobiDBLite consensus disorder prediction 21 69 - -
Pste6g04080 425 MobiDBLite consensus disorder prediction 120 306 - -
Pste6g04080 425 SMART tpr_5 303 336 IPR019734 GO:0005515
Pste6g04080 425 SMART tpr_5 377 410 IPR019734 GO:0005515
Pste6g04080 425 SMART tpr_5 343 376 IPR019734 GO:0005515
Pste6g04080 425 MobiDBLite consensus disorder prediction 89 103 - -
Pste6g04080 425 Gene3D Tetratricopeptide repeat domain 303 424 IPR011990 GO:0005515
Pste6g04080 425 MobiDBLite consensus disorder prediction 21 103 - -
Pste6g04080 425 PANTHER OS03G0340700 PROTEIN 1 425 - -
Pste6g04080 425 MobiDBLite consensus disorder prediction 120 148 - -
Pste6g04080 425 MobiDBLite consensus disorder prediction 154 204 - -
Pste6g04080 425 Pfam Tetratricopeptide repeat 379 409 IPR019734 GO:0005515
Pste6g04080 425 MobiDBLite consensus disorder prediction 236 269 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04080 318 420 Calmodulin-binding Proteins AT3G25230 32.075 2.57e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04080 6 30084834 30088796 Pste6g04080 6 30084834 30088796 ECH