Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste6g04040 | atgaagctatttggtttccccttgaagagttccatcagtagtgaggacatactttgtgacgatggtggaaagaggtttaagtgccgatactgtcgtcgccaatttggcaattctcaagcactaggtggccaccaaaatgcacacaggagagaacgtgctaagcttgctcagttcaaatatcttctccgtcttcaacagcatgaccaaaggttcaaagcagcatcaaatggagcaaaaggtccatcaggaacttcaattcatccaaatgggtcacctaacgttactgttgctagtgcaaatactgctcctggtgcagctttgtttcaatttcatcatagtgcagcttcatcactgctcctgcaagtaccagctggtgccaatcatgtggatctcaacctcagactagcttgctcctcagacaactcatga | 429 | 0.0 | MKLFGFPLKSSISSEDILCDDGGKRFKCRYCRRQFGNSQALGGHQNAHRRERAKLAQFKYLLRLQQHDQRFKAASNGAKGPSGTSIHPNGSPNVTVASANTAPGAALFQFHHSAASSLLLQVPAGANHVDLNLRLACSSDNS | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste6g04040 | 142 | Gene3D | Classic Zinc Finger | 8 | 81 | - | - | |
Pste6g04040 | 142 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 26 | 53 | IPR013087 | - | |
Pste6g04040 | 142 | PANTHER | ZINC FINGER PROTEIN 5 | 17 | 108 | IPR044299 | GO:0010090 | |
Pste6g04040 | 142 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 28 | 48 | IPR013087 | - | |
Pste6g04040 | 142 | SUPERFAMILY | beta-beta-alpha zinc fingers | 22 | 53 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste6g04040 | Pste-Chr6 | 29696699 | 29697908 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste6g04040 | 1 | 58 | C2H2 Transcription Factor Family | AT5G06650 | 46.377 | 5.60e-13 | 61.2 |