Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04035 atggggagagctccttgctgtgagaaggtggggttgaagaaaggtcgatggactgctgaagaggataagatcttgaccgattacattcaagaaaacggtgagggatcatggaggtccttgcccaagaatgcaggtttgttaagatgtgggaaaagttgtagactgagatggatcaactacttgagatcagacgtcaagagaggaaacatcactcctcaagaagaagagatcattgtcaagttgcatgctgttctcggtaacaggtggtctgtaatagcaggacatttaccaggtcgaacggataatgaaataaagaattattggaattctcatttgaggagaaagatttactgcttcatgaagtctttaaatgaatgtctccctcccattgacatggtggctgtaaaagtagctgctagttccaagagaagaacaggtggtcgaggaggtacaaaaactcagccacccacgcaagaggacgacaacaacaacaacaacgtgtctcatacccaaaactcctcatgcgaagtgcctctagttcaaccaatgctcaaaagaagtgcaacttcacaaagtttcaacgatgaggagaacttaccggattactgtgacatcggggacaacatatatggcacacttgcttcgtgccccagcttggaagaagttgaggctttgggaccttatcaatggttagatgatgaaatattgaaacttagtcacatgtttgagaacggggtgttagtaaacccagatgggattttagccaacaatgatgaagagtggcttagtagaaataactatggagtggtgggagcaaatgaagagagcaagagtggtgtttggtgctcatcaaatgcagaaagtggggaatggaacacaagctgttcgtcagggaattctgtctatgactatcatcagtggccagatatgcatttagaaggtagtgttcaatcctataatccttgggatccttgtgaagaaaaccagaacgtgccatgcttttggggtactagccacattgaaggaaatggcttttatcagtaa 1044 0.0 MGRAPCCEKVGLKKGRWTAEEDKILTDYIQENGEGSWRSLPKNAGLLRCGKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNECLPPIDMVAVKVAASSKRRTGGRGGTKTQPPTQEDDNNNNNVSHTQNSSCEVPLVQPMLKRSATSQSFNDEENLPDYCDIGDNIYGTLASCPSLEEVEALGPYQWLDDEILKLSHMFENGVLVNPDGILANNDEEWLSRNNYGVVGANEESKSGVWCSSNAESGEWNTSCSSGNSVYDYHQWPDMHLEGSVQSYNPWDPCEENQNVPCFWGTSHIEGNGFYQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04035 347 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste6g04035 347 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Pste6g04035 347 MobiDBLite consensus disorder prediction 141 174 - -
Pste6g04035 347 CDD SANT 16 61 IPR001005 -
Pste6g04035 347 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste6g04035 347 FunFam Myb transcription factor 71 116 - -
Pste6g04035 347 Gene3D - 13 66 - -
Pste6g04035 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste6g04035 347 SMART sant 66 114 IPR001005 -
Pste6g04035 347 SMART sant 13 63 IPR001005 -
Pste6g04035 347 CDD SANT 71 112 IPR001005 -
Pste6g04035 347 Gene3D - 71 116 - -
Pste6g04035 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste6g04035 347 MobiDBLite consensus disorder prediction 146 174 - -
Pste6g04035 347 FunFam Myb transcription factor 11 67 - -
Pste6g04035 347 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste6g04035 347 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste6g04035 347 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04035 Pste-Chr6 29658983 29661033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04035 1 238 MYB Transcription Factor Family AT5G49330 55.000 5.69e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g04035 Myb_DNA-binding 4e-13 CL0123