Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04021 atggcaaagtcgaagaaccacactgctcacaatcagtcctacaaggcccataagaatggcataaaaaagccaaaaaggcaccgccacacttccaccaaagggatggatcccaagtttctgaggaatcaaaggtacgcaaggaagcataacaagaagagcggtgaaacaggaacggaagaagagtaa 186 0.0 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETGTEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04021 61 Gene3D - 1 61 - -
Pste6g04021 61 MobiDBLite consensus disorder prediction 1 61 - -
Pste6g04021 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 58 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pste6g04021 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pste6g04021 61 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04021 Pste-Chr6 29472827 29473724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04021 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 2.45e-33 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04021 6 29472827 29473724 Pste6g04021 6 29472827 29473724 ECH
Pste6g04021 6 29472827 29473724 Pste2g03076 2 30723152 30724198 PCT