Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03989 atgggaagtccaagggatgagctgaagaagaagatccaacagctggaggaaggacaagcgcacctgaagcaagaaatgtcaaagttgaaactctccgatgtgaggcacggccatcggcagaggtcgcactccgtgtctccccagcgttccagattgggcgctccgcccaggaagcggagcgatgcacctccgccctggaagagaggttcttgttcctttaaacactcctcgcctctgcagagggagagtcgcggcgccgaacccgatcctctaattcacggagttccaccctctgctccttccgccgtcaacctcactgaacgccagtatcttaatattttgcagtcaatgggacattctgttcatatattggatcttaattgtcgcgtaatatactggaaccgaagtgctgaaaatttatatggttatacagcagaggaagttctggggcaggatgggattgagctgcttgtggaccctagggattttgccttggccaatgatacagtgaaccgtgtgatgatgggagagggctggacggggcaatttccggtcaagaataagacgggagagaagttcttagctgtagcgactaatactcctttctatgatgatgatggaagcttagttggggtaatttgtgtttctagtgattcacggccctttcttgaaatgaaagttccgatgtctggtgtaataaggaacaccgagtcagattcagattcgggtggaacccgacctaaaagtagtagcattacaagtaaacttggcattgactctcaacagcctcttcaagttgctcttgcttcgaaaatttcaaatttggcatcaaaggtaagtaacaaagttaaatcaaggatctggacgggagaaaacaatgtggatcgtgaaggtgagagttgtgaaaatcatcattctgaacataatttgtcagaatctgctctttcagaccacagagaggatgctaattccagtggagctagcacccccagaggtgatatgcctccatcccattttggtgcattttctcaagttgaagaaaaatcccagggaaaagctttgagagggtctggtgatgagagtgacggaaaacctattcacaaaatcatacccgctaaggctgaagcctggattcagaggaaaacattatcatggccatggagaaccaaggatcgagaaggatcagagtcaaagaatgttggtggggcctggagacagaatgatcaagaaaatgaatcagttaatcagaagattctttcttctggcttgaagcaagaaagccaggcaggtgaaagtaatcgccctaataacaatgaggcttcaggatcctggtcctcctttaatgcgaacagaacaagtagtgccagcagctgtggaagtgctggcagttgtgctatcaataataaagtagatgtggacactgattgcttggattatgaaattttgtgggaggacctgacaattggagaacaaattgggcaaggctcttgtggaactgtatatcatgctctgtggtatggatcagatgttgccgtcaaagttttctctaagcaagaatattcagatgatgtgatactttccttccgtcaagaggtgtctgtcatgaaaaggcttcgacaccctaatattcttctcttcatgggggccgtgacttcacctcaacgtctctgcattgtgacagagtttctcccacgcggaagcttgtgccgcttgttacacagaaacacatctaaacttgactggaggcggcgagttcatatggccttggatattgcacgtggtgtaaattatcttcatcattgtaacccacctatcatccacagagatttaaagtcttcgaatcttctagttgataggaactggaccgtgaaggttggtgattttggtctttcacgtctaaagcatgaaacatatctcacaactaagacaggaaggggcacgcctcaatggatggcaccagaagttcttcgtaatgaaccatccgatgagaaatcggatgtttacagctttggagtaatattatgggaaattgcaactgaaaagataccttgggataatctcaactcaatgcaggtgattggagctgtaggattcatgaatcaacggctagaaattccaaaaaatgttgatccacggtgggcttctataattgagagctgctggcatagtgatccagcttgccgaccaacattcccggaactgcttgaaaggcttagagagctgcaaaaacagtatgccattcagttccaggcaatccgatccagcagcaaggaaagcgcccaaaaggagtcctag 2295 0.0 MGSPRDELKKKIQQLEEGQAHLKQEMSKLKLSDVRHGHRQRSHSVSPQRSRLGAPPRKRSDAPPPWKRGSCSFKHSSPLQRESRGAEPDPLIHGVPPSAPSAVNLTERQYLNILQSMGHSVHILDLNCRVIYWNRSAENLYGYTAEEVLGQDGIELLVDPRDFALANDTVNRVMMGEGWTGQFPVKNKTGEKFLAVATNTPFYDDDGSLVGVICVSSDSRPFLEMKVPMSGVIRNTESDSDSGGTRPKSSSITSKLGIDSQQPLQVALASKISNLASKVSNKVKSRIWTGENNVDREGESCENHHSEHNLSESALSDHREDANSSGASTPRGDMPPSHFGAFSQVEEKSQGKALRGSGDESDGKPIHKIIPAKAEAWIQRKTLSWPWRTKDREGSESKNVGGAWRQNDQENESVNQKILSSGLKQESQAGESNRPNNNEASGSWSSFNANRTSSASSCGSAGSCAINNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEIATEKIPWDNLNSMQVIGAVGFMNQRLEIPKNVDPRWASIIESCWHSDPACRPTFPELLERLRELQKQYAIQFQAIRSSSKESAQKES 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03989 764 SUPERFAMILY Protein kinase-like (PK-like) 475 738 IPR011009 -
Pste6g03989 764 SMART pas_2 108 175 IPR000014 -
Pste6g03989 764 MobiDBLite consensus disorder prediction 296 340 - -
Pste6g03989 764 PRINTS Tyrosine kinase catalytic domain signature 646 656 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 PRINTS Tyrosine kinase catalytic domain signature 665 687 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 PRINTS Tyrosine kinase catalytic domain signature 560 573 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 PRINTS Tyrosine kinase catalytic domain signature 709 731 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 PRINTS Tyrosine kinase catalytic domain signature 599 617 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 CDD PAS 121 218 IPR000014 -
Pste6g03989 764 MobiDBLite consensus disorder prediction 31 100 - -
Pste6g03989 764 ProSiteProfiles PAS repeat profile. 106 177 IPR000014 -
Pste6g03989 764 NCBIfam PAS domain S-box protein 107 218 IPR000014 -
Pste6g03989 764 MobiDBLite consensus disorder prediction 388 446 - -
Pste6g03989 764 MobiDBLite consensus disorder prediction 400 446 - -
Pste6g03989 764 MobiDBLite consensus disorder prediction 233 257 - -
Pste6g03989 764 FunFam PAS domain-containing protein tyrosine kinase 479 563 - -
Pste6g03989 764 Gene3D Phosphorylase Kinase; domain 1 479 563 - -
Pste6g03989 764 FunFam PAS domain-containing protein tyrosine kinase family protein 564 755 - -
Pste6g03989 764 SUPERFAMILY PYP-like sensor domain (PAS domain) 105 218 IPR035965 -
Pste6g03989 764 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 249 744 - -
Pste6g03989 764 Pfam Protein tyrosine and serine/threonine kinase 486 738 IPR001245 GO:0004672|GO:0006468
Pste6g03989 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Pste6g03989 764 Pfam PAS domain 121 218 IPR000014 -
Pste6g03989 764 CDD STKc_MAP3K-like 492 738 - -
Pste6g03989 764 MobiDBLite consensus disorder prediction 296 319 - -
Pste6g03989 764 ProSiteProfiles Protein kinase domain profile. 486 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03989 764 Gene3D PAS domain 119 221 - -
Pste6g03989 764 SMART serkin_6 486 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03989 764 Coils Coil 5 32 - -
Pste6g03989 764 Gene3D Transferase(Phosphotransferase) domain 1 564 764 - -
Pste6g03989 764 MobiDBLite consensus disorder prediction 346 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03989 Pste-Chr6 29185327 29195102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03989 4 755 MAP Kinase Kinase Kinase AT3G06620 59.322 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste6g03989 PK_Tyr_Ser-Thr 2.8e-68 CL0016