Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03977 atgctccaggcattgatgaatctgttctcgctgtgttggaagccgtttggccgcggttctgatcgaatcgattccattggagttatcgggagcagcttcgccggaagagaaggcagagacggtttgctctggttccgcgacgtcggaaaatatggctccggcgatttctccatggccgtcgttcaggccaaccaggttctcgaagatcagagccagatagagtccggtcctctcggcaccttcgtcggcatatacgacggtcacggaggacccgacgcctccagataccatattctaccttcagttttggttccttcatggggtatgggtgttggggcaatatcggctgagtcatgcggggttgtgacaactgagacaattgaaaaggcatttcaacagactgaagagggctacacggcccttgtgtcaggcttgtggaatgctcgacctcaaattgcaagtgctgggacctgttgtctagttggagtgatatttcagcagacactctttgtggcaaatgttggagattcccgtgttgtattgggtaagaaagttggcaacactggaggcatggctgcaattcagctgtctgcagaacacaatgcaaatcttgaggctgttaggcaggagcttaaagaattacatcctcatgatcctcaaattgttgtcctcaaacatggagtgtggagagtaaaaggcattattcaggtttctagatctataggtgatgtatatttgaagcacgcacagtttaaccgcgaaccacttaatcagaaattccgacttcctgaaccaatgaccatgcctatattgagtgctaatcccactattcttgctcatgctctccaaccaaatgattccttccttatatttgcatcagacggtttgtgggagcacttgagtaatgaaaaagctgtggatattgtgaacagcaatccacatgcgtttggatcattaggtttcactaaactagtagatggagtgggctatgaagccatagtggaagggagaaaagttggacccaaaacaaagttaaagaaatgggtgacaatgaagttgcaaacttgcagtgctcatggaaagggaagaaacgaaatgagggagaacgaatcgtcaggagaaattgaaagacaagggaggcaccgtgatttgcagcgcatttctgcgtttttggccacgaatggtggcgcaactcttgctcctatgagctgcgacgtgacgcctaccatcagagcagcaagtggccactcagagccgccccaccgctctatgccgcttttgcacgcttttaattactatggtaggggggttcattgggtcggaggacccgaagacctaatccaacccaaacagattgggttggtttttcttgtgatcagggtagtgccaagagacttattaaggcagctctccaggaagcagcaagaaagcgagaaatgcgatattcagaccttcaggcacaatgctaaacccggcactttcaattcgaagcgctctcgatcactgacttgtatcattgtaagcagtcctgtaccagtttttggcaactgtaccgttacctga 1563 0.0 MLQALMNLFSLCWKPFGRGSDRIDSIGVIGSSFAGREGRDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYHILPSVLVPSWGMGVGAISAESCGVVTTETIEKAFQQTEEGYTALVSGLWNARPQIASAGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGNTGGMAAIQLSAEHNANLEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHAQFNREPLNQKFRLPEPMTMPILSANPTILAHALQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAFGSLGFTKLVDGVGYEAIVEGRKVGPKTKLKKWVTMKLQTCSAHGKGRNEMRENESSGEIERQGRHRDLQRISAFLATNGGATLAPMSCDVTPTIRAASGHSEPPHRSMPLLHAFNYYGRGVHWVGGPEDLIQPKQIGLVFLVIRVVPRDLLRQLSRKQQESEKCDIQTFRHNAKPGTFNSKRSRSLTCIIVSSPVPVFGNCTVT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03977 520 PANTHER PROTEIN PHOSPHATASE 53 314 IPR015655 GO:0004722|GO:0006470
Pste6g03977 520 MobiDBLite consensus disorder prediction 361 380 - -
Pste6g03977 520 ProSiteProfiles PPM-type phosphatase domain profile. 55 391 IPR001932 -
Pste6g03977 520 MobiDBLite consensus disorder prediction 359 380 - -
Pste6g03977 520 SMART PP2C_4 42 407 IPR001932 -
Pste6g03977 520 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pste6g03977 520 CDD PP2Cc 56 313 IPR001932 -
Pste6g03977 520 Gene3D - 47 326 IPR036457 -
Pste6g03977 520 Pfam Protein phosphatase 2C 80 312 IPR001932 -
Pste6g03977 520 SUPERFAMILY PP2C-like 65 312 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03977 Pste-Chr6 29062692 29068978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03977 1 315 PP2C-type Phosphatase Gene Family AT3G17090 64.486 3.87e-141 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03977 6 29062692 29068978 Pste6g03977 6 29062692 29068978 ECH
Pste6g03977 6 29062692 29068978 Pste2g03012 2 30132583 30139468 PCT