Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03971 atgtctcatccaccattcctctctgccttcaacctcactgctggcagggaacagggacacatcacccaccccagggcgtatcttgaattgaacattattgaaatggcatcgtcatctatgataccaaacacggaactgacacgtgactccaagagacggaggaagaagaaatcacagctgaggcagcaagaggatcagagccgtccaaagtggaaatcccaagcgcagcaacaaatctactcctccaagctgcgccaagccttagccagactcaacatggggtccccaccgcgcccaggcaaagccgtgcgcgaagcagccgacagagtcctagccgtcacagccaaggggaggacgcgctggagccgagccatcctcaccaaccgcctcaagctcaagttcatcaaacacaagcgacagcgacccccaacccggtccaagaaacccaggctcagcgtttaccggttgaaggggaagggctcaccggctgtgcagaggaaagtcaagttcctcggacgcttggttcccggttgccgaaaagaacctttaccggttattttggaagaagccattgattatatacctgcgcttgagatgcaggttcgagccatgagcgctctttttaaccttctctcttcttcttcttcttcttcttcttcttcttcttcttccgccgccgcctctacttcaacgccacctagctcctag 708 0.0 MSHPPFLSAFNLTAGREQGHITHPRAYLELNIIEMASSSMIPNTELTRDSKRRRKKKSQLRQQEDQSRPKWKSQAQQQIYSSKLRQALARLNMGSPPRPGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFIKHKRQRPPTRSKKPRLSVYRLKGKGSPAVQRKVKFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSSSSSSSSSSSSSAAASTSTPPSS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03971 235 MobiDBLite consensus disorder prediction 212 235 - -
Pste6g03971 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 214 IPR036638 GO:0046983
Pste6g03971 235 MobiDBLite consensus disorder prediction 41 76 - -
Pste6g03971 235 CDD bHLH_AtIBH1_like 155 207 IPR044549 GO:0006355
Pste6g03971 235 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 73 214 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03971 Pste-Chr6 28988831 28990058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03971 67 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 56.442 7.77e-52 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03971 6 28988831 28990058 Pste2g03002 2 30076579 30077383 PCT