Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03959 atgcatttagcagtactattgtgtctactgatactgaagctcagtccaagctttgcaaatgatgggtatgggtatggtgatgacccattagggactaacatataccaacacacttgtcctgaagctgaggccatcatcttctattgggtggagcaggcagtgtttgaagactcaagaatgcctgcctcactgctcaggctacacttccatgattgctttggctgtgatgcttcagtcttgctagatgacacaatggactttgttggcgagaaaagtgcaggtccaaatttgaactctctaagaggattcgaagtaatcgacaaaatcaaatcggagctagaactagtctgtccgcagactgtctcttgtgctgacatactagcaactgcagcaagagattcggttcttctgtcaggaggtccaatttgggaggtgcaaatgggaaggaaagatggcattactgctagcaaggatgctgcaaataataacatcccaggtcctaactccactgtggatgagctcgtagctaagttccagaatgtaggcctttcacttaaagacatggtggccctttcaggtgcacacacaataggaaaagcccgctgcagaacatttagctctcgtttacagagtaatagtaactcagaaagcggtgatgctaatattgatttcatcgcatcattgcaacaattgtgctcaggagcagatagtagcaacacggttgcacatcttgatctggctacacctgctacgtttgataatcaatacttcgttaatcttctatctggggagggattgctgccatcagaccaggttcttgtcaatgggaatgatcagactcgacacattgtccaagcctacgtggagaacccattagcattctttgaggacttcaagctttccatgttgaaaatgggaaccttgctatcaccaactcacactaatggccagattcgtaccaactgccgaactattaactaa 981 0.0 MHLAVLLCLLILKLSPSFANDGYGYGDDPLGTNIYQHTCPEAEAIIFYWVEQAVFEDSRMPASLLRLHFHDCFGCDASVLLDDTMDFVGEKSAGPNLNSLRGFEVIDKIKSELELVCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDGITASKDAANNNIPGPNSTVDELVAKFQNVGLSLKDMVALSGAHTIGKARCRTFSSRLQSNSNSESGDANIDFIASLQQLCSGADSSNTVAHLDLATPATFDNQYFVNLLSGEGLLPSDQVLVNGNDQTRHIVQAYVENPLAFFEDFKLSMLKMGTLLSPTHTNGQIRTNCRTIN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03959 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Pste6g03959 326 Pfam Peroxidase 50 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 FunFam Peroxidase 33 177 - -
Pste6g03959 326 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Pste6g03959 326 SUPERFAMILY Heme-dependent peroxidases 30 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 Gene3D Peroxidase, domain 2 165 306 - -
Pste6g03959 326 FunFam Peroxidase 165 305 - -
Pste6g03959 326 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 PANTHER PEROXIDASE 72-RELATED 29 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste6g03959 326 Gene3D - 35 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03959 Pste-Chr6 28842784 28844281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03959 23 326 Peroxidase AT4G16270 62.258 4.23e-134 383