Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03935 atgatcgtgagccagaagatggtagcggaagccgaaatcatctgtcagcaaagcattccgatgttggacgtgaagtatcatgtttgcgtggcgcaagaacacaacgtgaaggttgaggtttcacccaaatcaccttcacctacggttccgatctttggccaagcaatgagttgctctgaaatcattaaagattccatattggaggcccctgcaatgaactttatcccgaatgtacgttctggtagctatgctgagattggacctcggatttccatggatgatgaacatatttgtgttgatgatctaggagctcatcttggatttgtgttcaagtgcccaataccaagtgcgttttatgcagtttttgatggtcatggagggcctcatgcagcctcttttgttaagaggaatgctatgagattgttttttgaagatgcggacatgctgcaatcatatgatactgatgtgcttttcctgaaaaagttggaggactcccatcggagagcttttatacgggcagatcttgcccttgctgatgaacaaactgttagtagttcttgtgggactactgcattgactgcccttgtgctcggaagacatttgcttgttgctaatgcaggtgactgtcgagctgttctttgccgcagaggtgtggcagttgatatgtctaacgatcacaagccaacttatctacccgaacagaggagggtggaggagttaggcgggtttattgatggtgatggatacctcaatagttatctttctgtaacccgtgcccttggggattgggacctgaaatttccacttggagctgcatctcctcttattgctgagcctgatgttcgactggttacattgactgaggatgatgagttcttgatcattggttgtgatgggatttgggatgtaatgtctagccaggttgcagttagtcttgttcgccaaggattaagaaggcatgatgacccacagcaatgtgccaaggaattggtcaaggaagcattgcgcctaaatacgtcagataatctcactgtgattgttgtatgcttgtcgcccattcaaagcattgttgaatcatgccctccccaaagacgaagattcaaagcttgcagtctgtctgaagaggcccgtaataggttgaagagtttgattgagggaaattga 1164 0.0 MIVSQKMVAEAEIICQQSIPMLDVKYHVCVAQEHNVKVEVSPKSPSPTVPIFGQAMSCSEIIKDSILEAPAMNFIPNVRSGSYAEIGPRISMDDEHICVDDLGAHLGFVFKCPIPSAFYAVFDGHGGPHAASFVKRNAMRLFFEDADMLQSYDTDVLFLKKLEDSHRRAFIRADLALADEQTVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGVAVDMSNDHKPTYLPEQRRVEELGGFIDGDGYLNSYLSVTRALGDWDLKFPLGAASPLIAEPDVRLVTLTEDDEFLIIGCDGIWDVMSSQVAVSLVRQGLRRHDDPQQCAKELVKEALRLNTSDNLTVIVVCLSPIQSIVESCPPQRRRFKACSLSEEARNRLKSLIEGN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03935 387 Gene3D - 69 354 IPR036457 -
Pste6g03935 387 SMART PP2C_SIG_2 94 350 IPR001932 -
Pste6g03935 387 SMART PP2C_4 69 348 IPR001932 -
Pste6g03935 387 PANTHER PROTEIN PHOSPHATASE 2C 73 348 IPR015655 GO:0004722|GO:0006470
Pste6g03935 387 SUPERFAMILY PP2C-like 74 352 IPR036457 -
Pste6g03935 387 CDD PP2Cc 78 350 IPR001932 -
Pste6g03935 387 FunFam Probable protein phosphatase 2C 22 63 353 - -
Pste6g03935 387 Pfam Protein phosphatase 2C 88 342 IPR001932 -
Pste6g03935 387 ProSiteProfiles PPM-type phosphatase domain profile. 79 350 IPR001932 -
Pste6g03935 387 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03935 Pste-Chr6 28539249 28542075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03935 1 386 PP2C-type Phosphatase Gene Family AT1G48040 57.935 4.64e-152 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03935 6 28539249 28542075 Pste6g03935 6 28539249 28542075 ECH